Inference of gene expression networks using memetic gene expression programming
- Authors: Zarnegar, Armita , Vamplew, Peter , Stranieri, Andrew
- Date: 2009
- Type: Text , Conference paper
- Relation: Paper presented at Thirty-Second Australasian Computer Science Conference (ACSC 2009), Wellington, New Zealand : Vol. 91, p. 17-23
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- Description: In this paper we aim to infer a model of genetic networks from time series data of gene expression profiles by using a new gene expression programming algorithm. Gene expression networks are modelled by differential equations which represent temporal gene expression relations. Gene Expression Programming is a new extension of genetic programming. Here we combine a local search method with gene expression programming to form a memetic algorithm in order to find not only the system of differential equations but also fine tune its constant parameters. The effectiveness of the proposed method is justified by comparing its performance with that of conventional genetic programming applied to this problem in previous studies.
A new model based on gene expression programming to estimate air flow in a single rock joint
- Authors: Khandelwal, Manoj , Armaghani, Danial , Faradonbeh, Roohollah , Ranjith, Pathegama , Ghoraba, Saber
- Date: 2016
- Type: Text , Journal article
- Relation: Environmental Earth Sciences Vol. 75, no. 9 (2016), p.
- Full Text: false
- Reviewed:
- Description: This paper is aimed to introduce and validate a gene expression programming (GEP) model to estimate the rate of air flow in triaxial conditions at various confining pressures incorporating cell pressure, air inlet pressure and air outlet pressure. To achieve the aim of this study, a series of laboratory experiments were designed and carried out and then a database comprising 47 datasets was prepared to develop new predictive models. A gene expression programming (GEP) model for prediction of air flow was proposed using the prepared datasets. In this regard, a series of sensitivity analyses were performed to choose the best GEP model. For comparison purposes, multiple regression (MR) analysis was also employed for air flow estimation. Several performance indices, i.e., coefficient of determination (CoD), mean absolute error (MAE), root mean square error (RMSE) and variance account for (VAF) were considered and calculated to evaluate the performance prediction of the developed models. Considering both training and testing datasets, the developed GEP model can provide higher performance prediction of rate of air flow in comparison to the MR model. © 2016, Springer-Verlag Berlin Heidelberg.
Blasting pattern optimization using gene expression programming and grasshopper optimization algorithm to minimise blast-induced ground vibrations
- Authors: Bayat, Parichehra , Monjezi, Mejrdamesj , Mehrdanesh, Amirhosseina , Khandelwal, Manoj
- Date: 2022
- Type: Text , Journal article
- Relation: Engineering with Computers Vol. 38, no. 4 (2022), p. 3341-3350
- Full Text:
- Reviewed:
- Description: Blast-induced ground vibration is considered as one of the most hazardous phenomena of mine blasting, which can even cause casualties and severe damages to the adjacent properties. Measuring peak particle velocity (PPV) is helpful to know the actual vibration level but prediction of blast vibration prior to the blast is a tedious job due to involvement of blast design, explosive and rock parameters. Nowadays, efficient application of intelligent systems has been approved in different branches of science and technology. In this paper, a gene expression programming (GEP) model was developed to predict PPV using various blasting patterns as model inputs, which showed a high level of accuracy for the implemented model. Also, to optimize blast pattern attaining minimum ground vibration during blasting operation, the developed functional GEP model was taken as objective function for grasshopper optimization algorithm (GOA). Construction of GOA model was performed using a trial and error mechanism to find out the best possible pertinent GOA parameters. Finally, it was observed that utilizing GOA technique, PPV can be reduced by 67% with optimized blast parameters including burden of 3.21 m, spacing of 3.75 m, and charge per delay of 225 kg. A sensitivity analysis was also performed to understand the influence of each input parameters on the blast vibrations. © 2021, The Author(s), under exclusive licence to Springer-Verlag London Ltd. part of Springer Nature.