The use and utility of surrogates in biodiversity monitoring programmes
- Sato, Chloe, Westgate, Martin, Barton, Philip, Foster, Claire, O'Loughlin, Luke
- Authors: Sato, Chloe , Westgate, Martin , Barton, Philip , Foster, Claire , O'Loughlin, Luke
- Date: 2019
- Type: Text , Journal article
- Relation: Journal of Applied Ecology Vol. 56, no. 6 (2019), p. 1304-1310
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- Description: **Please note that there are multiple authors for this article therefore only the name of the first 5 including Federation University Australia affiliate “Philip Barton” is provided in this record**
- Authors: Sato, Chloe , Westgate, Martin , Barton, Philip , Foster, Claire , O'Loughlin, Luke
- Date: 2019
- Type: Text , Journal article
- Relation: Journal of Applied Ecology Vol. 56, no. 6 (2019), p. 1304-1310
- Full Text:
- Reviewed:
- Description: **Please note that there are multiple authors for this article therefore only the name of the first 5 including Federation University Australia affiliate “Philip Barton” is provided in this record**
- Neilan, Wendy, Barton, Philip, McAlpine, Clive, Wood, Jeffrey, Lindenmayer, David
- Authors: Neilan, Wendy , Barton, Philip , McAlpine, Clive , Wood, Jeffrey , Lindenmayer, David
- Date: 2019
- Type: Text , Journal article
- Relation: Ecography Vol. 42, no. 1 (2019), p. 173-186
- Full Text: false
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- Description: Habitat loss and fragmentation are key processes causing biodiversity loss in human-modified landscapes. Knowledge of these processes has largely been derived from measuring biodiversity at the scale of ‘within-habitat’ fragments with the surrounding landscape considered as matrix. Yet, the loss of variation in species assemblages ‘among’ habitat fragments (landscape-scale) may be as important a driver of biodiversity loss as the loss of diversity ‘within’ habitat fragments (local-scale). We tested the hypothesis that heterogeneity in vegetation cover is important for maintaining alpha and beta diversity in human-modified landscapes. We surveyed bird assemblages in eighty 300-m-long transects nested within twenty 1-km 2 vegetation ‘mosaics’, with mosaics assigned to four categories defined by the cover extent and configuration of native eucalypt forest and exotic pine plantation. We examined bird assemblages at two spatial scales: 1) within and among transects, and 2) within and among mosaics. Alpha diversity was the mean species diversity within-transects or within-mosaics and beta diversity quantified the effective number of compositionally distinct transects or mosaics. We found that within-transect alpha diversity was highest in vegetation mosaics defined by continuous eucalypt forest, lowest in mosaics of continuous pine plantation, and at intermediate levels in mosaics containing eucalypt patches in a pine matrix. We found that eucalypt mosaics had lower beta diversity than other mosaic types when ignoring relative abundances, but had similar or higher beta diversity when weighting with species abundances. Mosaics containing both pine and eucalypt forest differed in their bird compositional variation among transects, despite sharing a similar suite of species. This configuration effect at the mosaic scale reflected differences in vegetation composition among transects. Maintaining heterogeneity in vegetation cover could help to maintain variation among bird assemblages across landscapes, thus partially offsetting local-scale diversity losses due to fragmentation. Critical to this is the retention of remnant native vegetation. © 2018 The Authors
A long-term habitat fragmentation experiment leads to morphological change in a species of carabid beetle
- Evans, Maldwyn, Banks, Sam, Barton, Philip, Davies, Kendi, Driscoll, Don
- Authors: Evans, Maldwyn , Banks, Sam , Barton, Philip , Davies, Kendi , Driscoll, Don
- Date: 2018
- Type: Text , Journal article
- Relation: Ecological Entomology Vol. 43, no. 3 (2018), p. 282-293
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- Description: 1. Habitat fragmentation and transformation are key drivers of species declines in landscapes. Most of the current understanding of species' responses to environmental change originates from studies of populations and communities. However, phenotypic variation offers another key aspect of species responses and could provide additional insights into the functional drivers of population change. 2. The goal of this study was to address this gap by exploring the morphological changes of a species of carabid beetle (Notonomus resplendens) with a known population response to the Wog Wog Habitat Fragmentation Experiment in Australia. We measured morphological traits associated with body size, head width, and dispersal ability. We quantified patterns of morphological variation over time and between native Eucalyptus forest fragments and the surrounding pine plantation matrix and the continuous intact native Eucalyptus forest controls. 3. We found sexually dimorphic morphological changes in response to the experimental treatments. Males increased in size, had larger legs and had smaller interocular widths in the matrix in both the short and long terms. Conversely, females became comparatively smaller and had increased interocular widths in the same treatments. Effects in the fragments were similar to those in the matrix, but exhibited more uncertainty. 4. Our results demonstrate that species can show morphological change in response to environmental change over very short time periods. We demonstrate that using both population and morphological data allows stronger inferences about the mechanisms behind species responses to environmental change. © 2017 The Royal Entomological Society
- Authors: Evans, Maldwyn , Banks, Sam , Barton, Philip , Davies, Kendi , Driscoll, Don
- Date: 2018
- Type: Text , Journal article
- Relation: Ecological Entomology Vol. 43, no. 3 (2018), p. 282-293
- Full Text:
- Reviewed:
- Description: 1. Habitat fragmentation and transformation are key drivers of species declines in landscapes. Most of the current understanding of species' responses to environmental change originates from studies of populations and communities. However, phenotypic variation offers another key aspect of species responses and could provide additional insights into the functional drivers of population change. 2. The goal of this study was to address this gap by exploring the morphological changes of a species of carabid beetle (Notonomus resplendens) with a known population response to the Wog Wog Habitat Fragmentation Experiment in Australia. We measured morphological traits associated with body size, head width, and dispersal ability. We quantified patterns of morphological variation over time and between native Eucalyptus forest fragments and the surrounding pine plantation matrix and the continuous intact native Eucalyptus forest controls. 3. We found sexually dimorphic morphological changes in response to the experimental treatments. Males increased in size, had larger legs and had smaller interocular widths in the matrix in both the short and long terms. Conversely, females became comparatively smaller and had increased interocular widths in the same treatments. Effects in the fragments were similar to those in the matrix, but exhibited more uncertainty. 4. Our results demonstrate that species can show morphological change in response to environmental change over very short time periods. We demonstrate that using both population and morphological data allows stronger inferences about the mechanisms behind species responses to environmental change. © 2017 The Royal Entomological Society
Species co-occurrence networks show reptile community reorganization under agricultural transformation
- Kay, Geoffrey, Tulloch, Ayesha, Barton, Philip, Cunningham, Saul, Driscoll, Don, Lindenmayer, David
- Authors: Kay, Geoffrey , Tulloch, Ayesha , Barton, Philip , Cunningham, Saul , Driscoll, Don , Lindenmayer, David
- Date: 2018
- Type: Text , Journal article
- Relation: Ecography Vol. 41, no. 1 (2018), p. 113-125
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- Description: Agricultural transformation represents one of the greatest threats to biodiversity, causing degradation and loss of habitat, leading to changes in the richness and composition of communities. These changes in richness and composition may, in turn, lead to altered species co-occurrence, but our knowledge of this remains limited. We used a novel co-occurrence network approach to examine the impact of agricultural transformation on reptile community structure within two large (> 172 000 km2; 224 sites) agricultural regions in southeastern Australia. We contrasted assemblages from sites surrounded by intact and modified landscapes and tested four key hypotheses that agricultural transformation leads to (H1) declines in species richness, (H2) altered assemblages, (H3) declines in overall co-occurrence, and (H4) complex restructuring of pairwise associations. We found that modified landscapes differed in composition but not richness compared with intact sites. Modified landscapes were also characterized by differences in co-occurrence network structure; with species sharing fewer sites with each other (reduced co-occurrence connectance), fewer highly-connected species (truncation of the frequency distribution of co-occurrence degree) and increased modularity of co-occurrence networks. Critically, overall loss of co-occurrence was underpinned by complex changes to the number and distribution of pair-wise co-occurrence links, with 41–44% of species also gaining associations with other species. Change in co-occurrence was not correlated with changes in occupancy, nor by functional trait membership, allowing a novel classification of species susceptibility to agricultural transformation. Our study reveals the value of using co-occurrence analysis to uncover impacts of agricultural transformation that may be masked in conventional studies of species richness and community composition. © 2017 The Authors
- Authors: Kay, Geoffrey , Tulloch, Ayesha , Barton, Philip , Cunningham, Saul , Driscoll, Don , Lindenmayer, David
- Date: 2018
- Type: Text , Journal article
- Relation: Ecography Vol. 41, no. 1 (2018), p. 113-125
- Full Text:
- Reviewed:
- Description: Agricultural transformation represents one of the greatest threats to biodiversity, causing degradation and loss of habitat, leading to changes in the richness and composition of communities. These changes in richness and composition may, in turn, lead to altered species co-occurrence, but our knowledge of this remains limited. We used a novel co-occurrence network approach to examine the impact of agricultural transformation on reptile community structure within two large (> 172 000 km2; 224 sites) agricultural regions in southeastern Australia. We contrasted assemblages from sites surrounded by intact and modified landscapes and tested four key hypotheses that agricultural transformation leads to (H1) declines in species richness, (H2) altered assemblages, (H3) declines in overall co-occurrence, and (H4) complex restructuring of pairwise associations. We found that modified landscapes differed in composition but not richness compared with intact sites. Modified landscapes were also characterized by differences in co-occurrence network structure; with species sharing fewer sites with each other (reduced co-occurrence connectance), fewer highly-connected species (truncation of the frequency distribution of co-occurrence degree) and increased modularity of co-occurrence networks. Critically, overall loss of co-occurrence was underpinned by complex changes to the number and distribution of pair-wise co-occurrence links, with 41–44% of species also gaining associations with other species. Change in co-occurrence was not correlated with changes in occupancy, nor by functional trait membership, allowing a novel classification of species susceptibility to agricultural transformation. Our study reveals the value of using co-occurrence analysis to uncover impacts of agricultural transformation that may be masked in conventional studies of species richness and community composition. © 2017 The Authors
Insect biodiversity meets ecosystem function : differential effects of habitat and insects on carrion decomposition
- Barton, Philip, Evans, Maldwyn
- Authors: Barton, Philip , Evans, Maldwyn
- Date: 2017
- Type: Text , Journal article
- Relation: Ecological Entomology Vol. 42, no. 3 (2017), p. 364-374
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- Description: 1. Ecological processes are maintained in different environments by different species performing similar functional roles. Yet, little is known about the role of the environment in shaping insect biodiversity associated with a process that is ephemeral and patchy. 2. In this study, the mass loss of carrion in response to contrasting habitat types (grassland or tree) was quantified experimentally, as well as the presence, diversity and composition of insect assemblages. Differences in insect assemblages between these two habitats were also examined. 3. It was found that the presence of insects led to a doubling in mass loss, but that grassland or tree habitat type had no effect on this process. By contrast, habitat type had a significant effect on the composition of generalist ant and beetle assemblages, but not on specialist fly assemblages. Given the colonisation of insects, carrion mass loss was negatively associated with increasing evenness of fly assemblages and increasing ant abundance. Variation in fly assemblage composition was also found to correlate with variation in carrion mass loss. 4. This study highlights the major role of habitat type in shaping the composition of generalist insects at carrion, but the minor role in affecting specialist and highly vagile insects. This complements the authors' findings that insect colonisation of carrion was critical to accelerated mass loss, and that fly assemblages were responsible for variation in this process, regardless of habitat. The present study sheds new light on the contribution of insect biodiversity to decomposition in variable environments, with consequences for carrion food webs and nutrient cycling. © 2017 The Royal Entomological Society
- Authors: Barton, Philip , Evans, Maldwyn
- Date: 2017
- Type: Text , Journal article
- Relation: Ecological Entomology Vol. 42, no. 3 (2017), p. 364-374
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- Description: 1. Ecological processes are maintained in different environments by different species performing similar functional roles. Yet, little is known about the role of the environment in shaping insect biodiversity associated with a process that is ephemeral and patchy. 2. In this study, the mass loss of carrion in response to contrasting habitat types (grassland or tree) was quantified experimentally, as well as the presence, diversity and composition of insect assemblages. Differences in insect assemblages between these two habitats were also examined. 3. It was found that the presence of insects led to a doubling in mass loss, but that grassland or tree habitat type had no effect on this process. By contrast, habitat type had a significant effect on the composition of generalist ant and beetle assemblages, but not on specialist fly assemblages. Given the colonisation of insects, carrion mass loss was negatively associated with increasing evenness of fly assemblages and increasing ant abundance. Variation in fly assemblage composition was also found to correlate with variation in carrion mass loss. 4. This study highlights the major role of habitat type in shaping the composition of generalist insects at carrion, but the minor role in affecting specialist and highly vagile insects. This complements the authors' findings that insect colonisation of carrion was critical to accelerated mass loss, and that fly assemblages were responsible for variation in this process, regardless of habitat. The present study sheds new light on the contribution of insect biodiversity to decomposition in variable environments, with consequences for carrion food webs and nutrient cycling. © 2017 The Royal Entomological Society
Remnant vegetation, plantings and fences are beneficial for reptiles in agricultural landscapes
- Pulsford, Stephanie, Driscoll, Don, Barton, Philip, Lindenmayer, David
- Authors: Pulsford, Stephanie , Driscoll, Don , Barton, Philip , Lindenmayer, David
- Date: 2017
- Type: Text , Journal article
- Relation: Journal of Applied Ecology Vol. 54, no. 6 (2017), p. 1710-1719
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- Description: Managing agricultural landscapes for biodiversity conservation is increasingly difficult as land use is modified or intensified for production. Finding ways to mitigate the negative effects of agriculture on biodiversity is therefore critical. We asked the question: How do remnant patches, paddock types and grazing regimes influence reptile assemblages in a grazing landscape? At 12 sites, we surveyed reptiles and environmental covariates in remnant woodland patches and in four paddock types: (i) grazed pasture, (ii) linear plantings, (iii) coarse woody debris (CWD) added to grazed pasture and (iv) fences between grazed pasture. Each site was either continuously or rotationally grazed. Remnant vegetation and other vegetation attributes such as tree cover and leaf litter greatly influenced reptiles. We recorded higher reptile abundance and species richness in areas with more tree cover and leaf litter. For rare species (captured in ≤4 sites <70 captures), there were 5·7 more animals and 2·6 more species in sites with 50% woody cover within 3 km compared to 5% woody cover. The abundance and richness of rare species, and one common species differed between paddock types and were higher in linear plantings and fence transects compared to CWD and pasture transects. Synthesis and applications. Grazed paddocks, particularly those with key features such as fences and plantings can provide habitat for reptiles. This suggests that discrete differentiation between patch and matrix does not apply for reptiles in these systems. Management to promote reptile conservation in agricultural landscapes should involve protecting existing remnant vegetation, regardless of amount; and promote key habitat features of trees, leaf litter and shrubs. Establishing plantings and fences is important as they support high numbers of less common reptiles and may facilitate reptiles to move through and use greater amounts of the landscape. © 2017 The Authors. Journal of Applied Ecology © 2017 British Ecological Society
- Authors: Pulsford, Stephanie , Driscoll, Don , Barton, Philip , Lindenmayer, David
- Date: 2017
- Type: Text , Journal article
- Relation: Journal of Applied Ecology Vol. 54, no. 6 (2017), p. 1710-1719
- Full Text:
- Reviewed:
- Description: Managing agricultural landscapes for biodiversity conservation is increasingly difficult as land use is modified or intensified for production. Finding ways to mitigate the negative effects of agriculture on biodiversity is therefore critical. We asked the question: How do remnant patches, paddock types and grazing regimes influence reptile assemblages in a grazing landscape? At 12 sites, we surveyed reptiles and environmental covariates in remnant woodland patches and in four paddock types: (i) grazed pasture, (ii) linear plantings, (iii) coarse woody debris (CWD) added to grazed pasture and (iv) fences between grazed pasture. Each site was either continuously or rotationally grazed. Remnant vegetation and other vegetation attributes such as tree cover and leaf litter greatly influenced reptiles. We recorded higher reptile abundance and species richness in areas with more tree cover and leaf litter. For rare species (captured in ≤4 sites <70 captures), there were 5·7 more animals and 2·6 more species in sites with 50% woody cover within 3 km compared to 5% woody cover. The abundance and richness of rare species, and one common species differed between paddock types and were higher in linear plantings and fence transects compared to CWD and pasture transects. Synthesis and applications. Grazed paddocks, particularly those with key features such as fences and plantings can provide habitat for reptiles. This suggests that discrete differentiation between patch and matrix does not apply for reptiles in these systems. Management to promote reptile conservation in agricultural landscapes should involve protecting existing remnant vegetation, regardless of amount; and promote key habitat features of trees, leaf litter and shrubs. Establishing plantings and fences is important as they support high numbers of less common reptiles and may facilitate reptiles to move through and use greater amounts of the landscape. © 2017 The Authors. Journal of Applied Ecology © 2017 British Ecological Society
Optimal taxonomic groups for biodiversity assessment: a meta-analytic approach
- Westgate, Martin, Tulloch, Ayesha, Barton, Philip, Pierson, Jennifer, Lindenmayer, David
- Authors: Westgate, Martin , Tulloch, Ayesha , Barton, Philip , Pierson, Jennifer , Lindenmayer, David
- Date: 2017
- Type: Text , Journal article
- Relation: Ecography Vol. 40, no. 4 (2017), p. 539-548
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- Description: A fundamental decision in biodiversity assessment is the selection of one or more study taxa, a choice that is often made using qualitative criteria such as historical precedent, ease of detection, or available technical or taxonomic expertise. A more robust approach would involve selecting taxa based on the a priori expectation that they will provide the best possible information on unmeasured groups, but data to inform such hypotheses are often lacking. Using a global meta-analysis, we quantified the proportion of variability that each of 12 taxonomic groups (at the Order level or above) explained in the richness or composition of other taxa. We then applied optimization to matrices of pairwise congruency to identify the best set of complementary surrogate groups. We found that no single taxon was an optimal surrogate for both the richness and composition of unmeasured taxa if we used simple methods to aggregate congruence data between studies. In contrast, statistical methods that accounted for well-known drivers of cross-taxon congruence (spatial extent, grain size, and latitude) lead to the prioritization of similar surrogates for both species richness and composition. Advanced statistical methods were also more effective at describing known ecological relationships between taxa than simple methods, and show that congruence is typically highest between taxonomically and functionally dissimilar taxa. Birds and vascular plants were most frequently selected by our algorithm as surrogates for other taxonomic groups, but the extent to which any one taxon was the ‘optimal’ choice of surrogate for other biodiversity was highly context-dependent. In the absence of other information – such as in data-poor areas of the globe, and under limited budgets for monitoring or assessment – ecologists can use our results to assess which taxa are most likely to reflect the distribution of the richness or composition of ‘total’ biodiversity. © 2016 The Authors
- Authors: Westgate, Martin , Tulloch, Ayesha , Barton, Philip , Pierson, Jennifer , Lindenmayer, David
- Date: 2017
- Type: Text , Journal article
- Relation: Ecography Vol. 40, no. 4 (2017), p. 539-548
- Full Text:
- Reviewed:
- Description: A fundamental decision in biodiversity assessment is the selection of one or more study taxa, a choice that is often made using qualitative criteria such as historical precedent, ease of detection, or available technical or taxonomic expertise. A more robust approach would involve selecting taxa based on the a priori expectation that they will provide the best possible information on unmeasured groups, but data to inform such hypotheses are often lacking. Using a global meta-analysis, we quantified the proportion of variability that each of 12 taxonomic groups (at the Order level or above) explained in the richness or composition of other taxa. We then applied optimization to matrices of pairwise congruency to identify the best set of complementary surrogate groups. We found that no single taxon was an optimal surrogate for both the richness and composition of unmeasured taxa if we used simple methods to aggregate congruence data between studies. In contrast, statistical methods that accounted for well-known drivers of cross-taxon congruence (spatial extent, grain size, and latitude) lead to the prioritization of similar surrogates for both species richness and composition. Advanced statistical methods were also more effective at describing known ecological relationships between taxa than simple methods, and show that congruence is typically highest between taxonomically and functionally dissimilar taxa. Birds and vascular plants were most frequently selected by our algorithm as surrogates for other taxonomic groups, but the extent to which any one taxon was the ‘optimal’ choice of surrogate for other biodiversity was highly context-dependent. In the absence of other information – such as in data-poor areas of the globe, and under limited budgets for monitoring or assessment – ecologists can use our results to assess which taxa are most likely to reflect the distribution of the richness or composition of ‘total’ biodiversity. © 2016 The Authors
Traits reveal ecological strategies driving carrion insect community assembly
- Evans, Maldwyn, Wallman, James, Barton, Philip
- Authors: Evans, Maldwyn , Wallman, James , Barton, Philip
- Date: 2020
- Type: Text , Journal article
- Relation: Ecological Entomology Vol. 45, no. 5 (2020), p. 966-977
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- Description: 1. The succession of carrion-associated (necrophilous) insects on decomposing carrion is well documented. To exploit the changing nutritious and dynamic resources available throughout the carrion decomposition process, different species colonise and consume carrion in a predictable temporal sequence. The traits of these necrophilous insects should reflect their ecological strategies. Morphological traits of these insects, such as body size and wing size, however, have not previously been examined during active and advanced decomposition. 2. We used fourth-corner multivariate generalised linear models to identify insect community morphological trait patterns and to quantify their change through time on decomposing rabbit carcasses in grassland and woodland environments. 3. We found that larger-bodied species of flies and carrion-specialist beetles were associated with the early stages of decomposition. The morphological traits of ants, in contrast, showed no changes at carcasses through time and instead showed body size differences between grassland and woodland environments. 4. Our findings indicate that specialist flies and beetles that arrive early in the decomposition process possess traits that enable rapid discovery of carrion at a large scale. Generalist beetles and ants do not share this same trait and are instead adapted to locate and consume a wider variety of resources in their preferred habitat type at their local scale. 5. Our results provide insights into the morphological adaptations linked to the ecological strategies of distinct components of carrion insect communities. Further, our results offer insights into the community assembly dynamics that structure the communities of necrophilous insect species. © 2020 The Royal Entomological Society
- Authors: Evans, Maldwyn , Wallman, James , Barton, Philip
- Date: 2020
- Type: Text , Journal article
- Relation: Ecological Entomology Vol. 45, no. 5 (2020), p. 966-977
- Full Text:
- Reviewed:
- Description: 1. The succession of carrion-associated (necrophilous) insects on decomposing carrion is well documented. To exploit the changing nutritious and dynamic resources available throughout the carrion decomposition process, different species colonise and consume carrion in a predictable temporal sequence. The traits of these necrophilous insects should reflect their ecological strategies. Morphological traits of these insects, such as body size and wing size, however, have not previously been examined during active and advanced decomposition. 2. We used fourth-corner multivariate generalised linear models to identify insect community morphological trait patterns and to quantify their change through time on decomposing rabbit carcasses in grassland and woodland environments. 3. We found that larger-bodied species of flies and carrion-specialist beetles were associated with the early stages of decomposition. The morphological traits of ants, in contrast, showed no changes at carcasses through time and instead showed body size differences between grassland and woodland environments. 4. Our findings indicate that specialist flies and beetles that arrive early in the decomposition process possess traits that enable rapid discovery of carrion at a large scale. Generalist beetles and ants do not share this same trait and are instead adapted to locate and consume a wider variety of resources in their preferred habitat type at their local scale. 5. Our results provide insights into the morphological adaptations linked to the ecological strategies of distinct components of carrion insect communities. Further, our results offer insights into the community assembly dynamics that structure the communities of necrophilous insect species. © 2020 The Royal Entomological Society
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