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Can community-based childhood obesity prevention programs reduce the socioeconomic status (SES) gradient with body mass index (BMI)?

- Sanigorski, Andrea, Bell, Colin, Kremer, Peter, Swinburn, Boyd

Seed germination ecology of Bidens pilosa and its implications for weed management

- Chauhan, Bhagirath, Ali, Hafiz, Florentine, Singarayer

  • Authors: Chauhan, Bhagirath , Ali, Hafiz , Florentine, Singarayer
  • Date: 2019
  • Type: Text , Journal article
  • Relation: Scientific Reports Vol. 9, no. 1 (2019), p.
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  • Description: It is now widely recognized that Bidens pilosa has become a problematic broadleaf weed in many ecosystems across the world and, particularly in the light of recent climate change conditions, closer management strategies are required to curtail its impact on agricultural cropping. In this investigation, experiments were conducted to evaluate the effect of environmental factors on the germination and emergence of B. pilosa, and also on the response of this weed to commonly available post-emergence herbicides in Australia. The environmental factors of particular interest to this current work were the effect of light and temperature, salinity, burial depth and moisture on B. pilosa since these are key management issues in Australian agriculture. In addition, the effects of a number of commonly used herbicides were examined, because of concerns regarding emerging herbicide resistance. In the tested light/dark regimes, germination was found to be higher at fluctuating day/night temperatures of 25/15 °C and 30/20 °C (92–93%) than at 35/25 °C (79%), whilst across the different temperature ranges, germination was higher in the light/dark regime (79–93%) than in complete darkness (22–38%). The standard five-minute temperature pretreatment required for 50% inhibition of maximum germination was found to be 160 °C, and it was further shown that no seeds germinated at temperatures higher than 240 °C. With regard to salinity, some B. pilosa seeds germinated (3%) in 200 mM sodium chloride (NaCl) but all failed to germinate at 250 mM NaCl. Germination declined from 89% to 2% as the external osmotic potential decreased from 0 to −0.6 MPa, and germination ceased at −0.8 MPa. Seeding emergence of B. pilosa was maximum (71%) for seeds placed on the soil surface and it was found that no seedlings emerged from a depth of 8 cm or greater. A depth of 3.75 cm was required to inhibit the seeds to 50% of the maximum emergence. In this study, application of glufosinate, glyphosate and paraquat provided commercially acceptable control levels (generally accepted as >90%) when applied at the four-leaf stage of B. pilosa. However, none of the herbicide treatments involved in this study provided this level of control when applied at the six-leaf stage. In summary, B. pilosa germination has been clearly shown to be stimulated by light and thus its emergence was greatest from the soil surface. This suggests that infestation from this weed will remain as a problem in no-till conservation agriculture systems, the use of which is increasing now throughout the world. It is intended that information generated from this study be used to develop more effective integrated management programs for B. pilosa and similar weeds in commercial agricultural environments which are tending toward conservation approaches. © 2019, The Author(s).

Overweight and obesity prevalence in children based on 6- or 12-month IOTF cut-points : Does interval size matter?

- Kremer, Peter, Bell, Andrew, Sanigorski, Andrea, Swinburn, Boyd

Trans-ethnic kidney function association study reveals putative causal genes and effects on kidney-specific disease aetiologies

- Morris, Andrew, Le, Thu, Wu, Haojia, Akbarov, Artur, van der Most, Peter, Hemani, Gibran, Smith, George, Mahajan, Anubha, Gaulton, Kyle, Nadkarni, Girish, Valladares-Salgado, Adan, Wacher-Rodarte, Niels, Mychaleckyj, Josyf, Dueker, Nicole, Guo, Xiuqing, Hai, Yang, Haessler, Jeffrey, Kamatani, Yoichiro, Stilp, Adrienne, Zhu, Gu, Cook, James, Arnlov, Johan, Blanton, Susan, de Borst, Martin, Bottinger, Erwin, Buchanan, Thomas, Cechova, Sylvia, Charchar, Fadi, Chu, Pei-Lun, Damman, Jeffrey, Eales, James, Gharavi, Ali, Giedraitis, Vilmantas, Heath, Andrew, Ipp, Eli, Kiryluk, Krzysztof, Kramer, Holly, Kubo, Michiaki, Larsson, Anders, Lindgren, Cecilia, Lu, Yingchang, Madden, Pamela, Montgomery, Grant, Papanicolaou, George, Raffel, Leslie, Sacco, Ralph, Sanchez, Elena, Stark, Holger, Sundstrom, Johan, Taylor, Kent, Xiang, Anny, Zivkovic, Aleksandra, Lind, Lars, Ingelsson, Erik, Martin, Nicholas, Whitfield, John, Cai, Jianwen, Laurie, Cathy, Okada, Yukinori, Matsuda, Koichi, Kooperberg, Charles, Chen, Yii-Der, Rundek, Tatjana, Rich, Stephen, Loos, Ruth, Parra, Esteban, Cruz, Miguel, Rotter, Jerome, Snieder, Harold, Tomaszewski, Maciej, Humphreys, Benjamin, Franceschini, Nora

Specific humoral response of hosts with variable schistosomiasis susceptibility

- Driguez, Patrick, McWilliam, Hamish, Gaze, Soraya, Piedrafita, David, Pearson, Mark, Nakajima, Rie, Duke, Mary, Trieu, Angela, Doolan, Denise, Cardoso, Fernanda, Jasinskas, Algis, Gobert, Geoffrey, Felgner, Philip, Loukas, Alex, Meeusen, Els, McManus, Donald

  • Authors: Driguez, Patrick , McWilliam, Hamish , Gaze, Soraya , Piedrafita, David , Pearson, Mark , Nakajima, Rie , Duke, Mary , Trieu, Angela , Doolan, Denise , Cardoso, Fernanda , Jasinskas, Algis , Gobert, Geoffrey , Felgner, Philip , Loukas, Alex , Meeusen, Els , McManus, Donald
  • Date: 2016
  • Type: Text , Journal article
  • Relation: Immunology and Cell Biology Vol. 94, no. 1 (2016), p. 52-65
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  • Description: The schistosome blood flukes are some of the largest global causes of parasitic morbidity. Further study of the specific antibody response during schistosomiasis may yield the vaccines and diagnostics needed to combat this disease. Therefore, for the purposes of antigen discovery, sera and antibody-secreting cell (ASC) probes from semi-permissive rats and sera from susceptible mice were used to screen a schistosome protein microarray. Following Schistosoma japonicum infection, rats had reduced pathology, increased antibody responses and broader antigen recognition profiles compared with mice. With successive infections, rat global serological reactivity and the number of recognized antigens increased. The local antibody response in rat skin and lung, measured with ASC probes, increased after parasite migration and contributed antigen-specific antibodies to the multivalent serological response. In addition, the temporal variation of anti-parasite serum antibodies after infection and reinfection followed patterns that appear related to the antigen driving the response. Among the 29 antigens differentially recognized by the infected hosts were numerous known vaccine candidates, drug targets and several S. japonicum homologs of human schistosomiasis resistance markers - the tegument allergen-like proteins. From this set, we prioritized eight proteins that may prove to be novel schistosome vaccine and diagnostic antigens. © 2016 Australasian Society for Immunology Inc. All rights reserved.

Projected increase in El Niño-driven tropical cyclone frequency in the Pacific

- Chand, Savin, Tory, Kevin, Ye, Hua, Walsh, Kevin

  • Authors: Chand, Savin , Tory, Kevin , Ye, Hua , Walsh, Kevin
  • Date: 2017
  • Type: Text , Journal article
  • Relation: Nature Climate Change Vol. 7, no. 2 (2017), p. 123-127
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  • Description: The El Niño/Southern Oscillation (ENSO) drives substantial variability in tropical cyclone (TC) activity around the world. However, it remains uncertain how the projected future changes in ENSO under greenhouse warming will affect TC activity, apart from an expectation that the overall frequency of TCs is likely to decrease for most ocean basins. Here we show robust changes in ENSO-driven variability in TC occurrence by the late twenty-first century. In particular, we show that TCs become more frequent (â 1/420-40%) during future-climate El Niño events compared with present-climate El Niño events - and less frequent during future-climate La Niña events - around a group of small island nations (for example, Fiji, Vanuatu, Marshall Islands and Hawaii) in the Pacific. We examine TCs across 20 models from the Coupled Model Intercomparison Project phase 5 database, forced under historical and greenhouse warming conditions. The 12 most realistic models identified show a strong consensus on El Niño-driven changes in future-climate large-scale environmental conditions that modulate development of TCs over the off-equatorial western Pacific and the central North Pacific regions. These results have important implications for climate change and adaptation pathways for the vulnerable Pacific island nations. © 2017 Macmillan Publishers Limited, part of Springer Nature. All rights reserved.

Nitrogen fixation and nifH diversity in human gut microbiota

- Igai, Katsura, Itakura, Manabu, Nishijima, Suguru, Tsurumaru, Hirohito, Suda, Wataru, Tsutaya, Takumi, Tomitsuka, Eriko, Tadokoro, Kiyoshi, Baba, Jun, Odani, Shingo, Natsuhara, Kazumi, Morita, Ayako, Yoneda, Minoru, Greenhill, Andrew, Horwood, Paul, Inoue, Jun-ichi, Ohkuma, Moriya, Hongoh, Yuichi, Yamamoto, Taro, Siba, Peter, Hattori, Masahira, Minamisawa, Kiwamu, Umezaki, Masahiro

  • Authors: Igai, Katsura , Itakura, Manabu , Nishijima, Suguru , Tsurumaru, Hirohito , Suda, Wataru , Tsutaya, Takumi , Tomitsuka, Eriko , Tadokoro, Kiyoshi , Baba, Jun , Odani, Shingo , Natsuhara, Kazumi , Morita, Ayako , Yoneda, Minoru , Greenhill, Andrew , Horwood, Paul , Inoue, Jun-ichi , Ohkuma, Moriya , Hongoh, Yuichi , Yamamoto, Taro , Siba, Peter , Hattori, Masahira , Minamisawa, Kiwamu , Umezaki, Masahiro
  • Date: 2016
  • Type: Text , Journal article
  • Relation: Scientific Reports Vol. 6, no. (2016), p. 1-11
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  • Description: It has been hypothesized that nitrogen fixation occurs in the human gut. However, whether the gut microbiota truly has this potential remains unclear. We investigated the nitrogen-fixing activity and diversity of the nitrogenase reductase (NifH) genes in the faecal microbiota of humans, focusing on Papua New Guinean and Japanese individuals with low to high habitual nitrogen intake. A 15 N 2 incorporation assay showed significant enrichment of 15 N in all faecal samples, irrespective of the host nitrogen intake, which was also supported by an acetylene reduction assay. The fixed nitrogen corresponded to 0.01% of the standard nitrogen requirement for humans, although our data implied that the contribution in the gut in vivo might be higher than this value. The nifH genes recovered in cloning and metagenomic analyses were classified in two clusters: one comprising sequences almost identical to Klebsiella sequences and the other related to sequences of Clostridiales members. These results are consistent with an analysis of databases of faecal metagenomes from other human populations. Collectively, the human gut microbiota has a potential for nitrogen fixation, which may be attributable to Klebsiella and Clostridiales strains, although no evidence was found that the nitrogen-fixing activity substantially contributes to the host nitrogen balance. © The Author(s) 2016.

A novel Y-specific long non-coding RNA associated with cellular lipid accumulation in HepG2 cells and Atherosclerosis-related genes

- Molina, Elsa, Chew, Guat, Myers, Stephen, Clarence, Elyse, Eales, James, Tomaszewski, Maciej, Charchar, Fadi

  • Authors: Molina, Elsa , Chew, Guat , Myers, Stephen , Clarence, Elyse , Eales, James , Tomaszewski, Maciej , Charchar, Fadi
  • Date: 2017
  • Type: Text , Journal article
  • Relation: Scientific Reports Vol. 7, no. 1 (2017), p. 1-12
  • Relation: http://purl.org/au-research/grants/nhmrc/1009490
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  • Description: There is an increasing appreciation for the role of the human Y chromosome in phenotypic differences between the sexes in health and disease. Previous studies have shown that genetic variation within the Y chromosome is associated with cholesterol levels, which is an established risk factor for atherosclerosis, the underlying cause of coronary artery disease (CAD), a major cause of morbidity and mortality worldwide. However, the exact mechanism and potential genes implicated are still unidentified. To date, Y chromosome-linked long non-coding RNAs (lncRNAs) are poorly characterized and the potential link between these new regulatory RNA molecules and hepatic function in men has not been investigated. Advanced technologies of lncRNA subcellular localization and silencing were used to identify a novel intergenic Y-linked lncRNA, named lnc-KDM5D-4, and investigate its role in fatty liver-associated atherosclerosis. We found that lnc-KDM5D-4 is retained within the nucleus in hepatocytes. Its knockdown leads to changes in genes leading to increased lipid droplets formation in hepatocytes resulting in a downstream effect contributing to the chronic inflammatory process that underpin CAD. Our findings provide the first evidence for the implication of lnc-KDM5D-4 in key processes related to fatty liver and cellular inflammation associated with atherosclerosis and CAD in men.

National income inequality predicts cultural variation in mouth to mouth kissing

- Watkins, Christopher, Leongómez, Juan, Bovet, Jeanne, Żelaźniewicz, Agnieszka, Korbmacher, Max, Varella, Marco, Fernandez, Ana, Wagstaff, Danielle, Bolgan, Samuela

  • Authors: Watkins, Christopher , Leongómez, Juan , Bovet, Jeanne , Żelaźniewicz, Agnieszka , Korbmacher, Max , Varella, Marco , Fernandez, Ana , Wagstaff, Danielle , Bolgan, Samuela
  • Date: 2019
  • Type: Text , Journal article
  • Relation: Scientific Reports Vol. 9, no. 1 (2019), p. 1-9
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  • Description: Romantic mouth-to-mouth kissing is culturally widespread, although not a human universal, and may play a functional role in assessing partner health and maintaining long-term pair bonds. Use and appreciation of kissing may therefore vary according to whether the environment places a premium on good health and partner investment. Here, we test for cultural variation (13 countries from six continents) in these behaviours/attitudes according to national health (historical pathogen prevalence) and both absolute (GDP) and relative wealth (GINI). Our data reveal that kissing is valued more in established relationships than it is valued during courtship. Also, consistent with the pair bonding hypothesis of the function of romantic kissing, relative poverty (income inequality) predicts frequency of kissing across romantic relationships. When aggregated, the predicted relationship between income inequality and kissing frequency (r = 0.67, BCa 95% CI[0.32,0.89]) was over five times the size of the null correlations between income inequality and frequency of hugging/cuddling and sex. As social complexity requires monitoring resource competition among large groups and predicts kissing prevalence in remote societies, this gesture may be important in the maintenance of long-term pair bonds in specific environments.

Socio-demographic and injury-related factors contributing to activity limitations and participation restrictions in people with spinal cord injury in Bangladesh

- Kader, Manzur, Perera, Nirmala, Hossain, Mohammad, Islam, Redwanul

  • Authors: Kader, Manzur , Perera, Nirmala , Hossain, Mohammad , Islam, Redwanul
  • Date: 2018
  • Type: Text , Journal article
  • Relation: Spinal Cord Vol. 56, no. 3 (2018), p. 239-246
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  • Description: Study design: Cross-sectional study. Objectives: To identify socio-demographic and injury-related factors that contribute to activity limitations and participation restrictions in people with spinal cord injury (SCI) in Bangladesh. Setting: Centre for the Rehabilitation of the Paralysed (CRP), Savar, Dhaka, Bangladesh. Methods: This study involved 120 (83% men) participants with SCI; their median (interquartile range) age and injury duration were 34 (25-43) years and 5 (2-10) years, respectively. Data were collected from the follow-up records kept by the Community Based Rehabilitation (CBR) unit of CRP and a subsequent home visit that included interview-Administered questions, questionnaires, and a neurological examination. The dependent variables were activity limitations and participation restrictions, assessed with the World Health Organization Disability Assessment Schedule 2.0 (WHODAS 2.0, scored 0-100; a high score indicates greater activity limitations and participation restrictions). Independent variables included socio-demographic factors (i.e., age, sex, marital status, educational level, monthly household income, employment status, and place of residence) and injury-related factors (i.e., injury duration, cause of injury, injury severity, and type of paralysis). Multivariable linear regression analyses were performed to identify the factors that independently contributed to activity limitations and participation restrictions. Results: Three significant independent variables explained 20.7% of the variance in activity limitations and participation restrictions (WHODAS 2.0 score), in which tetraplegia was the strongest significant contributing factor, followed by rural residence and complete injury. Conclusions: This study would indicate that tetraplegia, complete injury, and residing in a rural area are the major contributions in limiting the activity and participation following SCI in Bangladesh.

The y chromosome : A blueprint for men's health?

- Maan, Akhlaq, Eales, James, Akbarov, Artur, Rowland, Joshua, Xu, Xiaoguang, Jobling, Mark, Charchar, Fadi, Tomaszewski, Maciej

  • Authors: Maan, Akhlaq , Eales, James , Akbarov, Artur , Rowland, Joshua , Xu, Xiaoguang , Jobling, Mark , Charchar, Fadi , Tomaszewski, Maciej
  • Date: 2017
  • Type: Text , Journal article , Review
  • Relation: European Journal of Human Genetics Vol. 25, no. 11 (2017), p. 1181-1188
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  • Description: The Y chromosome has long been considered a genetic wasteland' on a trajectory to completely disappear from the human genome. The perception of its physiological function was restricted to sex determination and spermatogenesis. These views have been challenged in recent times with the identification of multiple ubiquitously expressed Y-chromosome genes and the discovery of several unexpected associations between the Y chromosome, immune system and complex polygenic traits. The collected evidence suggests that the Y chromosome influences immune and inflammatory responses in men, translating into genetically programmed susceptibility to diseases with a strong immune component. Phylogenetic studies reveal that carriers of a common European lineage of the Y chromosome (haplogroup I) possess increased risk of coronary artery disease. This occurs amidst upregulation of inflammation and suppression of adaptive immunity in this Y lineage, as well as inferior outcomes in human immunodeficiency virus infection. From structural analysis and experimental data, the UTY (Ubiquitously Transcribed Tetratricopeptide Repeat Containing, Y-Linked) gene is emerging as a promising candidate underlying the associations between Y-chromosome variants and the immunity-driven susceptibility to complex disease. This review synthesises the recent structural, experimental and clinical insights into the human Y chromosome in the context of men's susceptibility to disease (with a particular emphasis on cardiovascular disease) and provides an overview of the paradigm shift in the perception of the Y chromosome. © 2017 The Author(s).

An investigation of the effects of stage of ensilage on Nassella neesiana seeds, for reducing seed viability and injury to livestock

- Weller, Sandra, Florentine, Singarayer, Sillitoe, Jim, Grech, Charles, McLaren, David

  • Authors: Weller, Sandra , Florentine, Singarayer , Sillitoe, Jim , Grech, Charles , McLaren, David
  • Date: 2016
  • Type: Text , Journal article
  • Relation: Scientific Reports Vol. 6, no. (2016), p. 1-7
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  • Description: The noxious weed Nassella neesiana is established on a wide range of productive land throughout southeastern Australia. N. neesiana seeds, when mature, are sharp, causing injury to livestock, thus posing a problem in fodder bales. To reduce infestations of agricultural weeds in situ, production of silage from weed-infested pastures is practised as part of integrated weed management (IWM). However, there is little data to demonstrate whether this process is useful to reduce infestations or the harmful properties of N. neesiana. Therefore, the minimum duration of ensilage required to reduce the viability of N. neesiana seeds was investigated, both with and without addition of ensilage inoculants in this process. Also, the decreasing propensity of the seeds to injure livestock, after various times and conditions of ensilage, was assessed. Ensilage inoculant reduced seed germination probability to zero after 35 days. When no inoculant was added, zero viability was achieved after 42 days. A qualitative assessment of the hardness of ensilaged seeds found seed husks were softer (and therefore safer) after 42 days, whether inoculant was used or not. Therefore, we suggest that both the viability of N. neesiana seeds and hardness of seed casings are significantly reduced after 42 days, thereby reducing the risks of seed dispersal and injury to livestock.

The pressure of finding human hypertension genes : New tools, old dilemmas

- Charchar, Fadi, Zimmerli, Lukas, Tomaszewski, Maciej

  • Authors: Charchar, Fadi , Zimmerli, Lukas , Tomaszewski, Maciej
  • Date: 2008
  • Type: Text , Journal article
  • Relation: Journal of Human Hypertension Vol. 22, no. (2008), p. 821–828
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  • Description: Researchers in hypertension genetics feel like they are left behind again. It always seems that the 'other' complex diseases are ahead in the race. Evolving new technologies in the form of genome-wide arrays and 'omics' technologies mean that investigators can now potentially identify many novel disease factors in one large-scale experiment. Hypertension research now faces the challenge of where to go next after the first genome-wide association experiments failed to provide robust candidates. In this review, we contemplate the old dilemma of whether such genes may ever be found; however, we believe advancing technologies and plummeting costs of large-scale experiments will contribute to the identification of novel molecules that underlie essential hypertension.

Aggregation behavior in water of amphiphilic diblock copolymers bearing biocompatible phosphorylcholine and cholesteryl groups

- Ohno, Sayaka, Hasegawa, Shoto, Liu, Huihua, Ishihara, Kazuhiko, Yusa, Shin-ichi

  • Authors: Ohno, Sayaka , Hasegawa, Shoto , Liu, Huihua , Ishihara, Kazuhiko , Yusa, Shin-ichi
  • Date: 2015
  • Type: Text , Journal article
  • Relation: Polymer Journal Vol. 47, no. 1 (2015), p. 71-76
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  • Description: Poly(2-(methacryloyloxy)ethyl phosphorylcholine)-block-poly(cholesteryl 6-methacryloyloxyhexanoate) (PMPC 82 -b-PChM n) copolymers with different PChM block lengths were prepared via reversible addition-fragmentation chain transfer controlled/living radical polymerization using a PMPC-based macro-chain transfer agent. The subscript number and n (=3 and 6) refer to the degree of polymerization of the PMPC and PChM blocks, respectively. PMPC 82 -b-PChM n cannot dissolve in water directly due to the strong hydrophobic nature of the PChM block. To prepare the aqueous solution, the diblock copolymer was dissolved in an organic solvent and then dialyzed against pure water. These diblock copolymers formed spherical and rod-like micelles in water, depending on the composition of cholesteryl (Chol) group in the polymer. The prepared aggregates were characterized using static light scattering, dynamic light scattering, transmission electron microscopy and fluorescence probe techniques. The characterization results suggest that the morphology of the polymer aggregates can be controlled from spherical to rod-like micelles by increasing the number of Chol groups in the polymer.

A three-stage intrathymic development pathway for the mucosal-associated invariant T cell lineage

- Koay, Hui-Fern, Gherardin, Nicholas, Enders, Anselm, Loh, Liyen, Mackay, Laura, Almeida, Catarina, Russ, Brendan, Nold-Petry, Claudia, Nold, Marcel, Bedoui, Sammy, Chen, Zhenjun, Corbett, Alexandra, Eckle, Sidonia, Meehan, Bronwyn, d'Udekem, Yves, Konstantinov, Igor, Lappas, Martha, Liu, Ligong, Goodnow, Chris, Fairlie, David, Rossjohn, Jamie, Chong, Mark, Kedzierska, Katherine, Berzins, Stuart, Belz, Gabrielle, McCluskey, James, Uldrich, Adam, Godfrey, Dale, Pellicci, Daniel

Parenteral administration of factor Xa/IIa inhibitors limits experimental aortic aneurysm and atherosclerosis

- Moran, Corey, Seto, Sai-Wang, Krishna, Smriti, Sharma, Surabhi, Jose, Roby, Biros, Erik, Wang, Yutang, Morton, Susan, Golledge, Jonathan

  • Authors: Moran, Corey , Seto, Sai-Wang , Krishna, Smriti , Sharma, Surabhi , Jose, Roby , Biros, Erik , Wang, Yutang , Morton, Susan , Golledge, Jonathan
  • Date: 2017
  • Type: Text , Journal article
  • Relation: Scientific Reports Vol. 7, no. (2017), p. 1-12
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  • Description: Intraluminal thrombus is a consistent feature of human abdominal aortic aneurysm (AAA). Coagulation factor Xa (FXa) catalyses FII to thrombin (FIIa). We examined the effect of FXa/FIIa inhibition on experimental aortic aneurysm in apolipoprotein E-deficient (ApoE '/') mice infused with angiotensin II (AngII). The concentration of FXa within the supra-renal aorta (SRA) correlated positively with SRA diameter. Parenteral administration of enoxaparin (FXa/IIa inhibitor) and fondaparinux (FXa inhibitor) over 14 days reduced to severity of aortic aneurysm and atherosclerosis in AngII-infused ApoE '/' mice. Enteral administration of the FIIa inhibitor dabigatran had no significant effect. Aortic protease-activated receptor (PAR)-2 expression increased in response to AngII infusion. Fondaparinux reduced SRA levels of FXa, FIIa, PAR-2, matrix metalloproteinase (MMP)2, Smad2/3 phosphorylation, and MOMA-2 positive cells in the mouse model. FXa stimulated Smad2/3 phosphorylation and MMP2 expression in aortic vascular smooth muscle cells (VSMC) in vitro. Expression of MMP2 in FXa-stimulated VSMC was downregulated in the presence of a PAR-2 but not a PAR-1 inhibitor. These findings suggest that FXa/FIIa inhibition limits aortic aneurysm and atherosclerosis severity due to down-regulation of vascular PAR-2-mediated Smad2/3 signalling and MMP2 expression. Inhibition of FXa/FIIa may be a potential therapy for limiting aortic aneurysm. © The Author(s) 2017.

Knockdown of stem cell regulator Oct4A in ovarian cancer reveals cellular reprogramming associated with key regulators of cytoskeleton-extracellular matrix remodelling

- Samardzija, Chantel, Greening, David, Escalona, Ruth, Chen, Maoshan, Bilandzic, Maree, Luwor, Rodney, Kannourakis, George, Findlay, Jock, Ahmed, Nuzhat

  • Authors: Samardzija, Chantel , Greening, David , Escalona, Ruth , Chen, Maoshan , Bilandzic, Maree , Luwor, Rodney , Kannourakis, George , Findlay, Jock , Ahmed, Nuzhat
  • Date: 2017
  • Type: Text , Journal article
  • Relation: Scientific Reports Vol. 7, no. (2017), p. 1-18
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  • Description: Oct4A is a master regulator of self-renewal and pluripotency in embryonic stem cells. It is a well-established marker for cancer stem cell (CSC) in malignancies. Recently, using a loss of function studies, we have demonstrated key roles for Oct4A in tumor cell survival, metastasis and chemoresistance in in vitro and in vivo models of ovarian cancer. In an effort to understand the regulatory role of Oct4A in tumor biology, we employed the use of an ovarian cancer shRNA Oct4A knockdown cell line (HEY Oct4A KD) and a global mass spectrometry (MS)-based proteomic analysis to investigate novel biological targets of Oct4A in HEY samples (cell lysates, secretomes and mouse tumor xenografts). Based on significant differential expression, pathway and protein network analyses, and comprehensive literature search we identified key proteins involved with biologically relevant functions of Oct4A in tumor biology. Across all preparations of HEY Oct4A KD samples significant alterations in protein networks associated with cytoskeleton, extracellular matrix (ECM), proliferation, adhesion, metabolism, epithelial-mesenchymal transition (EMT), cancer stem cells (CSCs) and drug resistance was observed. This comprehensive proteomics study for the first time presents the Oct4A associated proteome and expands our understanding on the biological role of this stem cell regulator in carcinomas. © 2017 The Author(s).

Monotreme glucagon-like peptide-1 in venom and gut : One gene - Two very different functions

- Tsend-Ayush, Enkhjargal, He, Chuan, Myers, Mark, Andrikopoulos, Sof, Wong, Nicole, Sexton, Patrick, Wootten, Denise, Forbes, Briony, Grutzner, Frank

  • Authors: Tsend-Ayush, Enkhjargal , He, Chuan , Myers, Mark , Andrikopoulos, Sof , Wong, Nicole , Sexton, Patrick , Wootten, Denise , Forbes, Briony , Grutzner, Frank
  • Date: 2016
  • Type: Text , Journal article
  • Relation: Scientific Reports Vol. 6, no. (2016), p. 1-12
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  • Description: The importance of Glucagon like peptide 1 (GLP-1) for metabolic control and insulin release sparked the evolution of genes mimicking GLP-1 action in venomous species (e.g. Exendin-4 in Heloderma suspectum (gila monster)). We discovered that platypus and echidna express a single GLP-1 peptide in both intestine and venom. Specific changes in GLP-1 of monotreme mammals result in resistance to DPP-4 cleavage which is also observed in the GLP-1 like Exendin-4 expressed in Heloderma venom. Remarkably we discovered that monotremes evolved an alternative mechanism to degrade GLP-1. We also show that monotreme GLP-1 stimulates insulin release in cultured rodent islets, but surprisingly shows low receptor affinity and bias toward Erk signaling. We propose that these changes in monotreme GLP-1 are the result of conflicting function of this peptide in metabolic control and venom. This evolutionary path is fundamentally different from the generally accepted idea that conflicting functions in a single gene favour duplication and diversification, as is the case for Exendin-4 in gila monster. This provides novel insight into the remarkably different metabolic control mechanism and venom function in monotremes and an unique example of how different selective pressures act upon a single gene in the absence of gene duplication. © The Author(s) 2016.

Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function

- Pattaro, C, Teumer, A, Gorski, M, Chu, A.Y., Li, M, Mijatovic, V, Garnaas, M, Tin, A, Charchar, Fadi

  • Authors: Pattaro, C , Teumer, A , Gorski, M , Chu, A.Y. , Li, M , Mijatovic, V , Garnaas, M , Tin, A , Charchar, Fadi
  • Date: 2016
  • Type: Text , Journal article
  • Relation: Nature Communications Vol. 7, no. (2016), p. 1-19
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  • Description: Reduced glomerular filtration rate defines chronic kidney disease and is associated with cardiovascular and all-cause mortality. We conducted a meta-analysis of genome-wide association studies for estimated glomerular filtration rate (eGFR), combining data across 133,413 individuals with replication in up to 42,166 individuals. We identify 24 new and confirm 29 previously identified loci. Of these 53 loci, 19 associate with eGFR among individuals with diabetes. Using bioinformatics, we show that identified genes at eGFR loci are enriched for expression in kidney tissues and in pathways relevant for kidney development and transmembrane transporter activity, kidney structure, and regulation of glucose metabolism. Chromatin state mapping and DNase I hypersensitivity analyses across adult tissues demonstrate preferential mapping of associated variants to regulatory regions in kidney but not extra-renal tissues. These findings suggest that genetic determinants of eGFR are mediated largely through direct effects within the kidney and highlight important cell types and biological pathways. © 2016, Nature Publishing Group. All rights reserved. Please note that there are two hundred and six authors for this article and we have included only the Federation University Australia affiliate.

Change in dominance determines herbivore effects on plant biodiversity

- Koerner, Sally, Smith, Melinda, Burkepile, Deron, Hanan, Niall, Avolio, Meghan, Collins, Scott, Knapp, Alan, Lemoine, Nathan, Forrestel, Elizabeth, Eby, Stephanie, Thompson, Dave, Aguado-Santacruz, Gerardo, Anderson, John, Anderson, Michael, Angassa, Ayana, Bagchi, Sumanta, Bakker, Elisabeth, Bastin, Gary, Baur, Lauren, Beard, Karen, Beever, Erik, Bohlen, Patrick, Boughton, Elizabeth, Canestro, Don, Cesa, Ariela, Chaneton, Enrique, Cheng, Jimin, D'Antonio, Carla, Deleglise, Claire, Dembele, Fadiala, Dorrough, Josh, Eldridge, David, Fernandez-Going, Barbara, Fernandez-Lugo, Silvia, Fraser, Lauchlan, Freedman, Bill, Garcia-Salgado, Gonzalo, Goheen, Jacob, Guo, Liang, Husheer, Sean, Karembe, Moussa, Knops, Johannes, Kraaij, Tineke, Kulmatiski, Andrew, Kytoviita, Minna-Maarit, Lezama, Felipe, Loucougaray, Gregory, Loydi, Alejandro, Milchunas, Dan, Milton, Suzanne, Morgan, John, Moxham, Claire, Nehring, Kyle, Olff, Han, Palmer, Todd, Rebollo, Salvador, Riginos, Corinna, Risch, Anita, Rueda, Marta, Sankaran, Mahesh, Sasaki, Takehiro, Schoenecker, Kathryn, Schultz, Nick, Schutz, Martin, Schwabe, Angelika, Siebert, Frances, Smit, Christian, Stahlheber, Karen, Storm, Christian, Strong, Dustin, Su, Jishuai, Tiruvaimozhi, Yadugiri, Tyler, Claudia, Val, James, Vandegehuchte, Martijn, Veblen, Kari, Vermeire, Lance, Ward, David, Wu, Jianshuang, Young, Truman, Yu, Qiang, Zelikova, Tamara