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A data mining application of the incidence semirings

- Abawajy, Jemal, Kelarev, Andrei, Yearwood, John, Turville, Christopher

  • Authors: Abawajy, Jemal , Kelarev, Andrei , Yearwood, John , Turville, Christopher
  • Date: 2013
  • Type: Text , Journal article
  • Relation: Houston Journal of Mathematics Vol. 39, no. 4 (2013), p. 1083-1093
  • Relation: http://purl.org/au-research/grants/arc/LP0990908
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  • Description: This paper is devoted to a combinatorial problem for incidence semirings, which can be viewed as sets of polynomials over graphs, where the edges are the unknowns and the coefficients are taken from a semiring. The construction of incidence rings is very well known and has many useful applications. The present article is devoted to a novel application of the more general incidence semirings. Recent research on data mining has motivated the investigation of the sets of centroids that have largest weights in semiring constructions. These sets are valuable for the design of centroid-based classification systems, or classifiers, as well as for the design of multiple classifiers combining several individual classifiers. Our article gives a complete description of all sets of centroids with the largest weight in incidence semirings.

Changes of names, contents and attitudes to mathematical units

- Turville, Christopher, Pierce, Robyn, Barker, Ewan, Giri, Jason

  • Authors: Turville, Christopher , Pierce, Robyn , Barker, Ewan , Giri, Jason
  • Date: 2002
  • Type: Text , Conference paper
  • Relation: Paper presented at the 2nd International Conference on the Teaching of Mathematics, Crete, Greece : 1st June, 2003
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  • Description: Will this material be on the exam? Why do I need to know this stuff? These are the sorts of questions that have been regularly asked by our mathematics students. Pre-service mathematics teachers often suggest that they do not need to learn anything that they do not have to teach. Generally, these students appear to have very little aesthetic appreciation for mathematics and its applications. Currently, we teach five traditional mathematical content units that are provided mainly for pre-service mathematics teachers. These units have been adapted and modified over the years from units that were designed primarily for science students. They contained a heavy focus on calculus with a limited breadth of mathematical experience. After consulting widely on the best mathematical practices throughout Australia and internationally, it was decided to reform all of the mathematics units to make them more attractive to a wider audience. The units that are currently being developed are: Profit, Loss and Gambling; Upon the Shoulders of Giants; Logic and Imagination; Modelling and Change; Algorithms, Bits and Bytes; Space, Shape, and Design; and Modelling Reality. The overall goal of this redevelopment is to improve student attitudes and motivation by exposing them to a wide range of topics in mathematics that are usable and relevant. All of these units will incorporate current technology, contain realistic problems, and include visiting speakers. Student assessment in these units will consist of portfolios, projects and examinations. The introduction of these new units will result in students having a greater choice of the units they wish to study. In order to overcome potential logistical problems of a small mathematics department, innovative changes to the structure of the units will also be examined. This paper will provide the details of the establishment and content of these units.
  • Description: E1
  • Description: 2003000085

Data mining of the Australian adverse drug reactions database : A comparison of Bayesian and other statistical indicators

- Harvey, Jack, Turville, Christopher, Barty, Simon

  • Authors: Harvey, Jack , Turville, Christopher , Barty, Simon
  • Date: 2004
  • Type: Text , Journal article
  • Relation: International Transactions in Operational Research Vol. 11, no. (2004), p. 419-433
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  • Description: The Australian adverse drug reactions database is derived from 140,000 reports over 30 years, including many instances of multiple drugs and multiple reactions. There are several thousand different drugs and reactions, and so the drug-reaction table is large and sparse. To aid rapid expert assessment of new reports, Bayesian approaches are being compared with other statistical methods for the re-evaluation of historical data and to provide early indications of emerging trends. Bayesian methods provide more balanced detection criteria than either descriptive statistics such as relative risks, which are subject to large sampling variation for rare co-occurrences, or statistical significance levels which are conversely weighted towards the most common co-occurrences. In this paper the various methods are reviewed and some indicative early results are presented.
  • Description: C1
  • Description: 2003000879

Eastern North Pacific tropical cyclone activity in historical and future CMIP5 experiments : Assessment with a model-independent tracking scheme

- Bell, Samuel, Chand, Savin, Tory, Kevin, Turville, Christopher, Ye, Harvey

  • Authors: Bell, Samuel , Chand, Savin , Tory, Kevin , Turville, Christopher , Ye, Harvey
  • Date: 2019
  • Type: Text , Journal article
  • Relation: Climate Dynamics Vol. 53, no. 7-8 (2019), p. 4841-4855
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  • Description: The sensitivity of tropical cyclone (TC) projection results to different models and the detection and tracking scheme used is well established in the literature. Here, future climate projections of TC activity in the Eastern North Pacific basin (ENP, defined from 0 degrees to 40 degrees N and 180 degrees to similar to 75 degrees W) are assessed with a model- and basin-independent detection and tracking scheme that was trained in reanalysis data. The scheme is applied to models from the Coupled Model Intercomparison Project Phase 5 (CMIP5) experiments forced under the historical and Representative Concentration Pathway 8.5 (RCP8.5) conditions. TC tracks from the observed records and models are analysed simultaneously with a curve-clustering algorithm, allowing observed and model tracks to be projected onto the same set of clusters. The ENP is divided into three clusters, one in the Central North Pacific (CNP) and two off the Mexican coast, as in prior studies. After accounting for model biases and auto-correlation, projection results under RCP8.5 indicated TC genesis to be significantly suppressed east of 125 degrees W, and significantly enhanced west of 145 degrees W by the end of the twenty-first century. Regional TC track exposure was found to significantly increase around Hawaii (similar to 86%), as shown in earlier studies, owing to increased TC genesis, particularly to the south-east of the island nation. TC exposure to Southern Mexico was shown to decrease (similar to 4%), owing to a south-westward displacement of TCs and overall suppression of genesis near the Mexican coastline. The large-scale environmental conditions most consistent with these projected changes were vertical wind shear and relative humidity.

Environmental factors affecting the germination and seedling emergence of two populations of an emerging agricultural weed : Wild lettuce (Lactuca serriola)

- Chadha, Aakansha, Florentine, Singarayer, Chauhan, Bhagirath, Long, Benjamin, Jayasundera, Mithila, Javaid, Muhammad, Turville, Christopher

  • Authors: Chadha, Aakansha , Florentine, Singarayer , Chauhan, Bhagirath , Long, Benjamin , Jayasundera, Mithila , Javaid, Muhammad , Turville, Christopher
  • Date: 2019
  • Type: Text , Journal article
  • Relation: Crop and Pasture Science Vol. 70, no. 8 (2019), p. 709-717
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  • Description: Wild lettuce (Lactuca serriola L.) is a significant emerging agricultural and environmental weed in many countries. This invasive species is now naturalised in Australia and is claimed to cause significant losses within the agricultural industry. Sustainable management of wild lettuce has been hampered by a lack of detailed knowledge of its seed ecology. Laboratory-based studies were performed to examine the potential influence of environmental factors including temperature and light conditions, salinity, pH, moisture availability and burial depth on the germination and emergence of two spatially distant populations of wild lettuce. Results suggested that the germination of wild lettuce seeds occurred across a broad range of temperature conditions (12-h cycle: 30°C/20°C, 25°C/15°C and 17°C/7°C) for both populations. We also found that these seeds are non-photoblastic germination was not affected by darkness, with >80% germination in darkness for both populations at all tested temperature ranges. Germination significantly declined as salinity and osmotic stress increased for both populations, with seeds from the Tempy population were more affected by NaCl >100 mM than seeds from Werribee, but in neither population was there any observed effect of pH on germination (>80% germination in both populations at all tested pH ranges). For both populations, germination significantly decreased as burial depth increased however, the two populations differed with regard to response to burial depth treatment, whereby seeds from the Tempy population had higher emergence than those from Werribee at 0.5 cm burial depth. These results suggest that light-reducing management techniques such as mulching or use of crop residues will be unsuccessful for preventing germination of wild lettuce. By contrast, burial of seeds at a depth of at least 4 cm will significantly reduce their emergence.

Griefers versus the Griefed - what motivates them to play Massively Multiplayer Online Role-Playing Games?

- Achterbosch, Leigh, Miller, Charlynn, Turville, Christopher, Vamplew, Peter

  • Authors: Achterbosch, Leigh , Miller, Charlynn , Turville, Christopher , Vamplew, Peter
  • Date: 2014
  • Type: Text , Journal article
  • Relation: The Computer Games Journal Vol. 3, no. 1 (2014), p. 5-18
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  • Description: 'Griefing' is a term used to describe when a player within a multiplayer online environment intentionally disrupts another player’s game experience for his or her own personal enjoyment or gain. Every day a certain percentage of users of Massively Multiplayer Online Role-Playing Games (MMORPG) are experiencing some form of griefing. There have been studies conducted in the past that attempted to ascertain the factors that motivate users to play MMORPGs. A limited number of studies specifically examined the motivations of users who perform griefing (who are also known as 'griefers'). However, those studies did not examine the motivations of users subjected to griefing. Therefore, the aim of this paper is to examine the factors that motivate the subjects of griefing to play MMORPGs, as well as the factors motivating the griefers. The authors conducted an online survey with the intention to discover the motivations for playing MMORPGs among those whom identified themselves as (i) those that perform griefing, and (ii) those who have been subjected to griefing. A previously devised motivational model by Nick Yee that incorporated ten factors was used to determine the respondents’ motivational trends. In general, players who identified themselves as griefers were more likely to be motivated by all three 'achievement' sub-factors (advancement, game mechanics and competition) at the detriment of all other factors. The subjects of griefing were highly motivated by 'advancement' and 'mechanics', but they ranked 'competition' significantly lower (compared to the griefers). In addition, 'immersion' factors were rated highly by the respondents who were subjected to griefing, with a significantly higher rating of the 'escapism' factor (compared with rankings by griefers). In comparison to the griefers, the respondents subjected to griefing with many years’ experience in the genre of MMORPGs, also placed a greater emphasis on the 'socializing' and 'relationship' factors. Overall, the griefers in this survey considered 'achievement' to be a prime motivating factor, whereas the griefed players tended to be motivated by all ten factors to a similar degree.

Polyclonal T-Cells Express CD1a in Langerhans Cell Histiocytosis (LCH) Lesions

- West, Jennifer, Olsen, Sharon, Mitchell, Jenée, Priddle, Ross, Luke, Jennifer, Åkefeldt, Selma Olsson, Henter, Jan-Inge, Turville, Christopher, Kannourakis, George

  • Authors: West, Jennifer , Olsen, Sharon , Mitchell, Jenée , Priddle, Ross , Luke, Jennifer , Åkefeldt, Selma Olsson , Henter, Jan-Inge , Turville, Christopher , Kannourakis, George
  • Date: 2014
  • Type: Text , Journal article , Article
  • Relation: PLoS ONE Vol. 9, no. 10 (2014), p. 1-12
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  • Description: Langerhans cell histiocytosis (LCH) is a complex and poorly understood disorder that has characteristics of both inflammatory and neoplastic disease. By using eight-colour flow cytometry, we have identified a previously unreported population of CD1a+/CD3+ T-cells in LCH lesions. The expression of CD1a is regarded as a hallmark of this disease; however, it has always been presumed that it was only expressed by pathogenic Langerhans cells (LCs). We have now detected CD1a expression by a range of T-cell subsets within all of the LCH lesions that were examined, establishing that CD1a expression in these lesions is no longer restricted to pathogenic LCs. The presence of CD1a+ T-cells in all of the LCH lesions that we have studied to date warrants further investigation into their biological function to determine whether these cells are important in the pathogenesis of LCH.[ABSTRACT FROM AUTHOR]
  • Description: Langerhans cell histiocytosis (LCH) is a complex and poorly understood disorder that has characteristics of both inflammatory and neoplastic disease. By using eight-colour flow cytometry, we have identified a previously unreported population of CD1a+/CD3+ T-cells in LCH lesions. The expression of CD1a is regarded as a hallmark of this disease; however, it has always been presumed that it was only expressed by pathogenic Langerhans cells (LCs). We have now detected CD1a expression by a range of T-cell subsets within all of the LCH lesions that were examined, establishing that CD1a expression in these lesions is no longer restricted to pathogenic LCs. The presence of CD1a+ T-cells in all of the LCH lesions that we have studied to date warrants further investigation into their biological function to determine whether these cells are important in the pathogenesis of LCH. [ABSTRACT FROM AUTHOR] Copyright of PLoS ONE is the property of Public Library of Science and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Projections of southern hemisphere tropical cyclone track density using CMIP5 models

- Bell, Samuel, Chand, Savin, Tory, Kevin, Dowdy, Andrew, Turville, Christopher, Ye, Harvey

  • Authors: Bell, Samuel , Chand, Savin , Tory, Kevin , Dowdy, Andrew , Turville, Christopher , Ye, Harvey
  • Date: 2019
  • Type: Text , Journal article
  • Relation: Climate Dynamics Vol. 52, no. 9-10 (2019), p. 6065-6079
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  • Description: A recently validated algorithm for detecting and tracking tropical cyclones (TCs) in coarse resolution climate models was applied to a selected group of 12 models from the Coupled Model Intercomparison Project (CMIP5) to assess potential changes in TC track characteristics in the Southern Hemisphere (SH) due to greenhouse warming. Current-climate simulations over the period 1970–2000 are first evaluated against observations using measures of TC genesis location and frequency, as well as track trajectory and lifetime in seven objectively defined genesis regions. The 12-model (12-M) ensemble showed substantial skill in reproducing a realistic TC climatology over the evaluation period. To address potential biases associated with model interdependency, analyses were repeated with an ensemble of five independent models (5-M). Results from both the 12-M and 5-M ensembles were very similar, instilling confidence in the models for climate projections if the current TC-climate relationship is to remain stationary. Projected changes in TC track density between the current- and future-climate (2070–2100) simulations under the Representatives Concentration 8.5 Pathways (RCP8.5) are also assessed. Overall, projection results showed a substantial decrease (~ 1–3 per decade) in track density over most parts of the SH by the end of the twenty-first century. This decrease is attributed to a significant reduction in TC numbers (~ 15–42%) consistent with changes in large-scale environmental parameters such as relative vorticity, environmental vertical wind shear and relative humidity. This study may assist with adaption pathways and implications for regional-scale climate change for vulnerable regions in the SH.

Statistical assessment of the OWZ Tropical Cyclone Tracking Scheme in ERA-Interim

- Bell, Samuel, Chand, Savin, Tory, Kevin, Turville, Christopher

  • Authors: Bell, Samuel , Chand, Savin , Tory, Kevin , Turville, Christopher
  • Date: 2018
  • Type: Text , Journal article
  • Relation: Journal of Climate Vol. 31, no. 6 (2018), p. 2217-2232
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  • Description: The Okubo–Weiss–Zeta (OWZ) tropical cyclone (TC) detection scheme, which has been used to detect TCs in climate, seasonal prediction, and weather forecast models, is assessed on its ability to produce a realistic TC track climatology in the ERA-Interim product over the 25-yr period 1989 to 2013. The analysis focuses on TCs that achieve gale-force (17ms21) sustained winds. Objective criteria were established to define TC tracks once they reach gale force for both observed and detected TCs. A lack of consistency between storm tracks preceding this level of intensity led these track segments to be removed from the analysis.Asubtropical jet (STJ) diagnostic is used to terminate transitioning TCs and is found to be preferable to a fixed latitude cutoff point. TC tracks were analyzed across seven TC basins, using a probabilistic clustering technique that is based on regression mixture models. The technique grouped TC tracks together based on their geographical location and shape of trajectory in five separate ‘‘cluster regions’’ around the globe. A mean trajectory was then regressed for each cluster that showed good agreement between the detected and observed tracks. Other track measures such as interannual TC days and translational speeds were also replicated to a satisfactory level, with TC days showing limited sensitivity to different latitude cutoff points. Successful validation in reanalysis data allows this model- and grid-resolution-independent TC tracking scheme to be applied to climate models with confidence in its ability to identify TC tracks in coarse-resolution climate models.

The germination success of Acacia longifolia subsp. longifolia (Fabaceae) : A comparison between its native and exotic ranges

- Welgama, Amali, Florentine, Singarayer, Marchante, Hélia, Javaid, Muhammad, Turville, Christopher

  • Authors: Welgama, Amali , Florentine, Singarayer , Marchante, Hélia , Javaid, Muhammad , Turville, Christopher
  • Date: 2019
  • Type: Text , Journal article
  • Relation: Australian Journal of Botany Vol. 67, no. 5 (2019), p. 414-424
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  • Description: Acacia longifolia subsp. longifolia is native to South-eastern Australia and has naturalised in many regions across the globe, including in Portugal, Spain, and South Africa invading extensive areas. Prolific seed production and a long-lived seedbank are considered key factors that enhance its invasiveness. Yet, the effects of different factors on germination are still underexplored. Seeds were collected from Portuguese and Australian populations, and germination was evaluated under different temperature regimes, photoperiods, pH levels, salt stress, osmotic potential and burial depths. Findings show both populations share some similar patterns but also reveal important differences related to their germination. Higher temperatures induce increased germination rates while the photoperiod has no effect on germination. Both populations had quicker seed emergence under dark conditions. Seeds from both populations decrease germination rate under increasing salt-stress and show a wide range of pH tolerance, but Australians seeds are more tolerant to increase of both parameters. Seeds from the Portuguese population are bigger and germinated from deeper depths than the Australian. Our results may provide information to improve management of this species seedbank. Germination can prevent by, tillage or other interventions that help to increase burial depths; adding lime (to increase the soil alkalinity) can reduce its germination rate in both geographical ranges.

The public health care cost of physical inactivity in a regional city of Australia

- Dassanayake, Jayantha, Payne, Warren, Liya, T., Turville, Christopher

Undergraduate mathematics curricula - A new approach

- Giri, Jason, Pierce, Robyn, Turville, Christopher

Use of Scenari-Aid to aid maintenance of stuttering therapy outcomes

- Swift, Michelle, Meredith, Grant, McCuloch, Julia, Turville, Christopher

Using stereotypes to improve early-match poker play

- Layton, Robert, Vamplew, Peter, Turville, Christopher

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