Collect, connect, upscale : towards coordinated monitoring of migratory shorebirds in the asia-pacific
- Fuller, Richard, Jackson, Micha, Amano, Tatsuya, Choi, Chi-Yeung, Hansen, Birgita
- Authors: Fuller, Richard , Jackson, Micha , Amano, Tatsuya , Choi, Chi-Yeung , Hansen, Birgita
- Date: 2021
- Type: Text , Journal article
- Relation: Australian Zoologist Vol. 41, no. 2 (2021), p. 205-213
- Full Text:
- Reviewed:
- Description: Monitoring migratory species can be extremely challenging. For example, millions of migratory shorebirds migrate from breeding grounds in northern China, Mongolia and Russia to East Asia and Australasia each year, traversing more than 20 countries while on migration. Studies within individual nations have identified rapid declines in many species, yet progress toward a fully unified scheme for continuous tracking of population change at the scale of the entire East Asian-Australasian Flyway has been slow. To reflect on lessons learned and consider how further progress might be made, we review some of the factors that have limited the full emergence of shorebird monitoring in the East Asian- Australasian Flyway, including fragmentation among multiple databases, low data readiness, inadequate metadata and gaps in survey coverage. We conclude that while technical solutions for many of these issues do exist, the biggest challenge is to navigate the significant organisational, socio-cultural and resourcing contexts of those people doing the monitoring. Technical solutions alone will not create a cohesive network of people whose local efforts are pooled to create robust flyway-scale monitoring. © 2021 Royal Zoological Society of New South Wales. All rights reserved. *Please note that there are multiple authors for this article therefore only the name of the first 5 including Federation University Australia affiliate “Birgita Hansen” is provided in this record**
- Authors: Fuller, Richard , Jackson, Micha , Amano, Tatsuya , Choi, Chi-Yeung , Hansen, Birgita
- Date: 2021
- Type: Text , Journal article
- Relation: Australian Zoologist Vol. 41, no. 2 (2021), p. 205-213
- Full Text:
- Reviewed:
- Description: Monitoring migratory species can be extremely challenging. For example, millions of migratory shorebirds migrate from breeding grounds in northern China, Mongolia and Russia to East Asia and Australasia each year, traversing more than 20 countries while on migration. Studies within individual nations have identified rapid declines in many species, yet progress toward a fully unified scheme for continuous tracking of population change at the scale of the entire East Asian-Australasian Flyway has been slow. To reflect on lessons learned and consider how further progress might be made, we review some of the factors that have limited the full emergence of shorebird monitoring in the East Asian- Australasian Flyway, including fragmentation among multiple databases, low data readiness, inadequate metadata and gaps in survey coverage. We conclude that while technical solutions for many of these issues do exist, the biggest challenge is to navigate the significant organisational, socio-cultural and resourcing contexts of those people doing the monitoring. Technical solutions alone will not create a cohesive network of people whose local efforts are pooled to create robust flyway-scale monitoring. © 2021 Royal Zoological Society of New South Wales. All rights reserved. *Please note that there are multiple authors for this article therefore only the name of the first 5 including Federation University Australia affiliate “Birgita Hansen” is provided in this record**
Demographic trends and reproductive patterns in the northern hairy-nosed wombat (Lasiorhinus krefftii) at Epping Forest National Park (Scientific), central Queensland
- Horsup, Alan, Austin, Jeremy, Fewster, Rachel, Hansen, Birgita, Harper, Dave, Molyneux, Jenny, White, Lauren, Taylor, Andrea
- Authors: Horsup, Alan , Austin, Jeremy , Fewster, Rachel , Hansen, Birgita , Harper, Dave , Molyneux, Jenny , White, Lauren , Taylor, Andrea
- Date: 2021
- Type: Text , Journal article
- Relation: Australian Mammalogy Vol. 43, no. 1 (2021), p. 72-84
- Full Text:
- Reviewed:
- Description: The critically endangered northern hairy-nosed wombat (Lasiorhinus krefftii) currently exists at only two locations in Queensland. Management, research and monitoring of the species at the main Epping Forest National Park (Scientific) population has occurred over the last four decades using a variety of tools, with the most complete dataset being provided by burrow activity monitoring over that period. Following a series of trap-based surveys in the 1980s and 1990s, wombat monitoring has employed DNA profiling of hairs collected remotely on sticky tape set at burrow entrances (since 2000), and passive infrared (PIR) cameras (since 2011). These techniques have produced a wealth of new information on the species. Using this new information, we aim to: (1) summarise the available demographic data and present new estimates using novel techniques for L. krefftii at Epping Forest NP; and (2) characterise reproductive patterns and their relationship with environmental factors for L. krefftii at Epping Forest NP. We find an ongoing increase in the population size at Epping Forest National Park, supported by healthy levels of reproduction despite periods of poor environmental conditions, notwithstanding the finding that cumulative monthly rainfall six months prior to sampling influenced birth rates. This trend suggests that the population will likely reach carrying capacity in the near future. It is timely to harvest the population to provide founders to a new site to establish an additional population, which will also reduce the risk of extinction and help secure the future of the species. © 2021 Australian Mammal Society.
- Authors: Horsup, Alan , Austin, Jeremy , Fewster, Rachel , Hansen, Birgita , Harper, Dave , Molyneux, Jenny , White, Lauren , Taylor, Andrea
- Date: 2021
- Type: Text , Journal article
- Relation: Australian Mammalogy Vol. 43, no. 1 (2021), p. 72-84
- Full Text:
- Reviewed:
- Description: The critically endangered northern hairy-nosed wombat (Lasiorhinus krefftii) currently exists at only two locations in Queensland. Management, research and monitoring of the species at the main Epping Forest National Park (Scientific) population has occurred over the last four decades using a variety of tools, with the most complete dataset being provided by burrow activity monitoring over that period. Following a series of trap-based surveys in the 1980s and 1990s, wombat monitoring has employed DNA profiling of hairs collected remotely on sticky tape set at burrow entrances (since 2000), and passive infrared (PIR) cameras (since 2011). These techniques have produced a wealth of new information on the species. Using this new information, we aim to: (1) summarise the available demographic data and present new estimates using novel techniques for L. krefftii at Epping Forest NP; and (2) characterise reproductive patterns and their relationship with environmental factors for L. krefftii at Epping Forest NP. We find an ongoing increase in the population size at Epping Forest National Park, supported by healthy levels of reproduction despite periods of poor environmental conditions, notwithstanding the finding that cumulative monthly rainfall six months prior to sampling influenced birth rates. This trend suggests that the population will likely reach carrying capacity in the near future. It is timely to harvest the population to provide founders to a new site to establish an additional population, which will also reduce the risk of extinction and help secure the future of the species. © 2021 Australian Mammal Society.
Accounting for cryptic population substructure enhances detection of inbreeding depression with genomic inbreeding coefficients: an example from a critically endangered marsupial
- Zilko, Joseph, Harley, Dan, Hansen, Birgita, Pavlova, Alexandra, Sunnucks, Paul
- Authors: Zilko, Joseph , Harley, Dan , Hansen, Birgita , Pavlova, Alexandra , Sunnucks, Paul
- Date: 2020
- Type: Text , Journal article
- Relation: Molecular Ecology Vol. 29, no. 16 (2020), p. 2978-2993
- Full Text:
- Reviewed:
- Description: Characterizing inbreeding depression in wildlife populations can be critical to their conservation. Coefficients of individual inbreeding can be estimated from genome-wide marker data. The degree to which sensitivity of inbreeding coefficients to population genetic substructure alters estimates of inbreeding depression in wild populations is not well understood. Using generalized linear models, we tested the power of two frequently used inbreeding coefficients that are calculated from genome-wide SNP markers, FH and F^III, to predict four fitness traits estimated over two decades in an isolated population of the critically endangered Leadbeater's possum. FH estimates inbreeding as excess observed homozygotes relative to equilibrium expectations, whereas F^III quantifies allelic similarity between the gametes that formed an individual, and upweights rare homozygotes. We estimated FH and F^III from 1,575 genome-wide SNP loci in individuals with fitness trait data (N = 179–237 per trait), and computed revised coefficients, FHby group and F^IIIby group, adjusted for population genetic substructure by calculating them separately within two different genetic groups of individuals identified in the population. Using FH or F^III in the models, inbreeding depression was detected for survival to sexual maturity, longevity and whether individuals bred during their lifetime. F^IIIby group (but not FHby group) additionally revealed significant inbreeding depression for lifetime reproductive output (total offspring assigned to each individual). Estimates of numbers of lethal equivalents indicated substantial inbreeding load, but differing between inbreeding estimators. Inbreeding depression, declining population size, and low and declining genetic diversity suggest that genetic rescue may assist in preventing extinction of this unique Leadbeater's possum population. © 2020 John Wiley & Sons Ltd
- Authors: Zilko, Joseph , Harley, Dan , Hansen, Birgita , Pavlova, Alexandra , Sunnucks, Paul
- Date: 2020
- Type: Text , Journal article
- Relation: Molecular Ecology Vol. 29, no. 16 (2020), p. 2978-2993
- Full Text:
- Reviewed:
- Description: Characterizing inbreeding depression in wildlife populations can be critical to their conservation. Coefficients of individual inbreeding can be estimated from genome-wide marker data. The degree to which sensitivity of inbreeding coefficients to population genetic substructure alters estimates of inbreeding depression in wild populations is not well understood. Using generalized linear models, we tested the power of two frequently used inbreeding coefficients that are calculated from genome-wide SNP markers, FH and F^III, to predict four fitness traits estimated over two decades in an isolated population of the critically endangered Leadbeater's possum. FH estimates inbreeding as excess observed homozygotes relative to equilibrium expectations, whereas F^III quantifies allelic similarity between the gametes that formed an individual, and upweights rare homozygotes. We estimated FH and F^III from 1,575 genome-wide SNP loci in individuals with fitness trait data (N = 179–237 per trait), and computed revised coefficients, FHby group and F^IIIby group, adjusted for population genetic substructure by calculating them separately within two different genetic groups of individuals identified in the population. Using FH or F^III in the models, inbreeding depression was detected for survival to sexual maturity, longevity and whether individuals bred during their lifetime. F^IIIby group (but not FHby group) additionally revealed significant inbreeding depression for lifetime reproductive output (total offspring assigned to each individual). Estimates of numbers of lethal equivalents indicated substantial inbreeding load, but differing between inbreeding estimators. Inbreeding depression, declining population size, and low and declining genetic diversity suggest that genetic rescue may assist in preventing extinction of this unique Leadbeater's possum population. © 2020 John Wiley & Sons Ltd
- «
- ‹
- 1
- ›
- »