A classification algorithm that derives weighted sum scores for insight into disease
- Quinn, Anthony, Stranieri, Andrew, Yearwood, John, Hafen, Gaudenz
- Authors: Quinn, Anthony , Stranieri, Andrew , Yearwood, John , Hafen, Gaudenz
- Date: 2009
- Type: Text , Conference paper
- Relation: Paper presented at Third Australasian Workshop on Health Informatics and Knowledge Management (HIKM 2009), Wellington, New Zealand : Vol. 97, p. 13-17
- Full Text:
- Description: Data mining is often performed with datasets associated with diseases in order to increase insights that can ultimately lead to improved prevention or treatment. Classification algorithms can achieve high levels of predictive accuracy but have limited application for facilitating the insight that leads to deeper understanding of aspects of the disease. This is because the representation of knowledge that arises from classification algorithms is too opaque, too complex or too sparse to facilitate insight. Clustering, association and visualisation approaches enable greater scope for clinicians to be engaged in a way that leads to insight, however predictive accuracy is compromised or non-existent. This research investigates the practical applications of Automated Weighted Sum, (AWSum), a classification algorithm that provides accuracy comparable to other techniques whilst providing some insight into the data. This is achieved by calculating a weight for each feature value that represents its influence on the class value. Clinicians are very familiar with weighted sum scoring scales so the internal representation is intuitive and easily understood. This paper presents results from the use of the AWSum approach with data from patients suffering from Cystic Fibrosis.
- Authors: Quinn, Anthony , Stranieri, Andrew , Yearwood, John , Hafen, Gaudenz
- Date: 2009
- Type: Text , Conference paper
- Relation: Paper presented at Third Australasian Workshop on Health Informatics and Knowledge Management (HIKM 2009), Wellington, New Zealand : Vol. 97, p. 13-17
- Full Text:
- Description: Data mining is often performed with datasets associated with diseases in order to increase insights that can ultimately lead to improved prevention or treatment. Classification algorithms can achieve high levels of predictive accuracy but have limited application for facilitating the insight that leads to deeper understanding of aspects of the disease. This is because the representation of knowledge that arises from classification algorithms is too opaque, too complex or too sparse to facilitate insight. Clustering, association and visualisation approaches enable greater scope for clinicians to be engaged in a way that leads to insight, however predictive accuracy is compromised or non-existent. This research investigates the practical applications of Automated Weighted Sum, (AWSum), a classification algorithm that provides accuracy comparable to other techniques whilst providing some insight into the data. This is achieved by calculating a weight for each feature value that represents its influence on the class value. Clinicians are very familiar with weighted sum scoring scales so the internal representation is intuitive and easily understood. This paper presents results from the use of the AWSum approach with data from patients suffering from Cystic Fibrosis.
AWSum - applying data mining in a health care scenario
- Quinn, Anthony, Jelinek, Herbert, Stranieri, Andrew, Yearwood, John
- Authors: Quinn, Anthony , Jelinek, Herbert , Stranieri, Andrew , Yearwood, John
- Date: 2008
- Type: Text , Conference paper
- Relation: Paper presented at International Conference on Intelligent Sensors, Sensor Networks and Information Processing, ISSNIP 2008, Sydney, New South Wales : 15th-18th December 2008 p. 291-296
- Full Text:
- Description: This paper investigates the application of a new data mining algorithm called Automated Weighted Sum, (AWSum), to diabetes screening data to explore its use in providing researchers with new insight into the disease and secondarily to explore the potential the algorithm has for the generation of prognostic models for clinical use. There are many data mining classifiers that produce high levels of predictive accuracy but their application to health research and clinical applications is limited because they are complex, produce results that are difficult to interpret and are difficult to integrate with current knowledge and practises. This is because most focus on accuracy at the expense of informing the user as to the influences that lead to their classification results. By providing this information on influences a researcher can be pointed to new potentially interesting avenues for investigation. AWSum measures influence by calculating a weight for each feature value that represents its influence on a class value relative to other class values. The results produced, although on limited data, indicated the approach has potential uses for research and has some characteristics that may be useful in the future development of prognostic models.
- Description: 2003006660
- Authors: Quinn, Anthony , Jelinek, Herbert , Stranieri, Andrew , Yearwood, John
- Date: 2008
- Type: Text , Conference paper
- Relation: Paper presented at International Conference on Intelligent Sensors, Sensor Networks and Information Processing, ISSNIP 2008, Sydney, New South Wales : 15th-18th December 2008 p. 291-296
- Full Text:
- Description: This paper investigates the application of a new data mining algorithm called Automated Weighted Sum, (AWSum), to diabetes screening data to explore its use in providing researchers with new insight into the disease and secondarily to explore the potential the algorithm has for the generation of prognostic models for clinical use. There are many data mining classifiers that produce high levels of predictive accuracy but their application to health research and clinical applications is limited because they are complex, produce results that are difficult to interpret and are difficult to integrate with current knowledge and practises. This is because most focus on accuracy at the expense of informing the user as to the influences that lead to their classification results. By providing this information on influences a researcher can be pointed to new potentially interesting avenues for investigation. AWSum measures influence by calculating a weight for each feature value that represents its influence on a class value relative to other class values. The results produced, although on limited data, indicated the approach has potential uses for research and has some characteristics that may be useful in the future development of prognostic models.
- Description: 2003006660
Classification for accuracy and insight : A weighted sum approach
- Quinn, Anthony, Stranieri, Andrew, Yearwood, John
- Authors: Quinn, Anthony , Stranieri, Andrew , Yearwood, John
- Date: 2007
- Type: Text , Conference paper
- Relation: Paper presented at Sixth Australasian Data Mining Conference, AusDM 2007, Gold Coast, Queensland, Victoria : 3rd-4th December 2007 p. 203-208
- Full Text:
- Description: This research presents a classifier that aims to provide insight into a dataset in addition to achieving classification accuracies comparable to other algorithms. The classifier called, Automated Weighted Sum (AWSum) uses a weighted sum approach where feature values are assigned weights that are summed and compared to a threshold in order to classify an example. Though naive, this approach is scalable, achieves accurate classifications on standard datasets and also provides a degree of insight. By insight we mean that the technique provides an appreciation of the influence a feature value has on class values, relative to each other. AWSum provides a focus on the feature value space that allows the technique to identify feature values and combinations of feature values that are sensitive and important for a classification. This is particularly useful in fields such as medicine where this sort of micro-focus and understanding is critical in classification.
- Description: 2003005504
- Authors: Quinn, Anthony , Stranieri, Andrew , Yearwood, John
- Date: 2007
- Type: Text , Conference paper
- Relation: Paper presented at Sixth Australasian Data Mining Conference, AusDM 2007, Gold Coast, Queensland, Victoria : 3rd-4th December 2007 p. 203-208
- Full Text:
- Description: This research presents a classifier that aims to provide insight into a dataset in addition to achieving classification accuracies comparable to other algorithms. The classifier called, Automated Weighted Sum (AWSum) uses a weighted sum approach where feature values are assigned weights that are summed and compared to a threshold in order to classify an example. Though naive, this approach is scalable, achieves accurate classifications on standard datasets and also provides a degree of insight. By insight we mean that the technique provides an appreciation of the influence a feature value has on class values, relative to each other. AWSum provides a focus on the feature value space that allows the technique to identify feature values and combinations of feature values that are sensitive and important for a classification. This is particularly useful in fields such as medicine where this sort of micro-focus and understanding is critical in classification.
- Description: 2003005504
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