Collect, connect, upscale : towards coordinated monitoring of migratory shorebirds in the asia-pacific
- Fuller, Richard, Jackson, Micha, Amano, Tatsuya, Choi, Chi-Yeung, Hansen, Birgita
- Authors: Fuller, Richard , Jackson, Micha , Amano, Tatsuya , Choi, Chi-Yeung , Hansen, Birgita
- Date: 2021
- Type: Text , Journal article
- Relation: Australian Zoologist Vol. 41, no. 2 (2021), p. 205-213
- Full Text:
- Reviewed:
- Description: Monitoring migratory species can be extremely challenging. For example, millions of migratory shorebirds migrate from breeding grounds in northern China, Mongolia and Russia to East Asia and Australasia each year, traversing more than 20 countries while on migration. Studies within individual nations have identified rapid declines in many species, yet progress toward a fully unified scheme for continuous tracking of population change at the scale of the entire East Asian-Australasian Flyway has been slow. To reflect on lessons learned and consider how further progress might be made, we review some of the factors that have limited the full emergence of shorebird monitoring in the East Asian- Australasian Flyway, including fragmentation among multiple databases, low data readiness, inadequate metadata and gaps in survey coverage. We conclude that while technical solutions for many of these issues do exist, the biggest challenge is to navigate the significant organisational, socio-cultural and resourcing contexts of those people doing the monitoring. Technical solutions alone will not create a cohesive network of people whose local efforts are pooled to create robust flyway-scale monitoring. © 2021 Royal Zoological Society of New South Wales. All rights reserved. *Please note that there are multiple authors for this article therefore only the name of the first 5 including Federation University Australia affiliate “Birgita Hansen” is provided in this record**
- Authors: Fuller, Richard , Jackson, Micha , Amano, Tatsuya , Choi, Chi-Yeung , Hansen, Birgita
- Date: 2021
- Type: Text , Journal article
- Relation: Australian Zoologist Vol. 41, no. 2 (2021), p. 205-213
- Full Text:
- Reviewed:
- Description: Monitoring migratory species can be extremely challenging. For example, millions of migratory shorebirds migrate from breeding grounds in northern China, Mongolia and Russia to East Asia and Australasia each year, traversing more than 20 countries while on migration. Studies within individual nations have identified rapid declines in many species, yet progress toward a fully unified scheme for continuous tracking of population change at the scale of the entire East Asian-Australasian Flyway has been slow. To reflect on lessons learned and consider how further progress might be made, we review some of the factors that have limited the full emergence of shorebird monitoring in the East Asian- Australasian Flyway, including fragmentation among multiple databases, low data readiness, inadequate metadata and gaps in survey coverage. We conclude that while technical solutions for many of these issues do exist, the biggest challenge is to navigate the significant organisational, socio-cultural and resourcing contexts of those people doing the monitoring. Technical solutions alone will not create a cohesive network of people whose local efforts are pooled to create robust flyway-scale monitoring. © 2021 Royal Zoological Society of New South Wales. All rights reserved. *Please note that there are multiple authors for this article therefore only the name of the first 5 including Federation University Australia affiliate “Birgita Hansen” is provided in this record**
Demographic trends and reproductive patterns in the northern hairy-nosed wombat (Lasiorhinus krefftii) at Epping Forest National Park (Scientific), central Queensland
- Horsup, Alan, Austin, Jeremy, Fewster, Rachel, Hansen, Birgita, Harper, Dave, Molyneux, Jenny, White, Lauren, Taylor, Andrea
- Authors: Horsup, Alan , Austin, Jeremy , Fewster, Rachel , Hansen, Birgita , Harper, Dave , Molyneux, Jenny , White, Lauren , Taylor, Andrea
- Date: 2021
- Type: Text , Journal article
- Relation: Australian Mammalogy Vol. 43, no. 1 (2021), p. 72-84
- Full Text:
- Reviewed:
- Description: The critically endangered northern hairy-nosed wombat (Lasiorhinus krefftii) currently exists at only two locations in Queensland. Management, research and monitoring of the species at the main Epping Forest National Park (Scientific) population has occurred over the last four decades using a variety of tools, with the most complete dataset being provided by burrow activity monitoring over that period. Following a series of trap-based surveys in the 1980s and 1990s, wombat monitoring has employed DNA profiling of hairs collected remotely on sticky tape set at burrow entrances (since 2000), and passive infrared (PIR) cameras (since 2011). These techniques have produced a wealth of new information on the species. Using this new information, we aim to: (1) summarise the available demographic data and present new estimates using novel techniques for L. krefftii at Epping Forest NP; and (2) characterise reproductive patterns and their relationship with environmental factors for L. krefftii at Epping Forest NP. We find an ongoing increase in the population size at Epping Forest National Park, supported by healthy levels of reproduction despite periods of poor environmental conditions, notwithstanding the finding that cumulative monthly rainfall six months prior to sampling influenced birth rates. This trend suggests that the population will likely reach carrying capacity in the near future. It is timely to harvest the population to provide founders to a new site to establish an additional population, which will also reduce the risk of extinction and help secure the future of the species. © 2021 Australian Mammal Society.
- Authors: Horsup, Alan , Austin, Jeremy , Fewster, Rachel , Hansen, Birgita , Harper, Dave , Molyneux, Jenny , White, Lauren , Taylor, Andrea
- Date: 2021
- Type: Text , Journal article
- Relation: Australian Mammalogy Vol. 43, no. 1 (2021), p. 72-84
- Full Text:
- Reviewed:
- Description: The critically endangered northern hairy-nosed wombat (Lasiorhinus krefftii) currently exists at only two locations in Queensland. Management, research and monitoring of the species at the main Epping Forest National Park (Scientific) population has occurred over the last four decades using a variety of tools, with the most complete dataset being provided by burrow activity monitoring over that period. Following a series of trap-based surveys in the 1980s and 1990s, wombat monitoring has employed DNA profiling of hairs collected remotely on sticky tape set at burrow entrances (since 2000), and passive infrared (PIR) cameras (since 2011). These techniques have produced a wealth of new information on the species. Using this new information, we aim to: (1) summarise the available demographic data and present new estimates using novel techniques for L. krefftii at Epping Forest NP; and (2) characterise reproductive patterns and their relationship with environmental factors for L. krefftii at Epping Forest NP. We find an ongoing increase in the population size at Epping Forest National Park, supported by healthy levels of reproduction despite periods of poor environmental conditions, notwithstanding the finding that cumulative monthly rainfall six months prior to sampling influenced birth rates. This trend suggests that the population will likely reach carrying capacity in the near future. It is timely to harvest the population to provide founders to a new site to establish an additional population, which will also reduce the risk of extinction and help secure the future of the species. © 2021 Australian Mammal Society.
Ecological processes associated with different animal taxa in urban environments
- Evans, Maldwyn, Barton, Philip, Westgate, Martin, Soga, Masashi, Fujita, Go, Miyashita, Tadashi
- Authors: Evans, Maldwyn , Barton, Philip , Westgate, Martin , Soga, Masashi , Fujita, Go , Miyashita, Tadashi
- Date: 2021
- Type: Text , Journal article
- Relation: Ecosphere Vol. 12, no. 8 (2021), p.
- Full Text:
- Reviewed:
- Description: Urbanization is increasing globally with wide-ranging consequences for biodiversity and the ecological processes it performs. Yet knowledge of the range of ecological processes supported by biodiversity in urban environments, and the different taxa that perform these processes is poorly understood. We used a text-analysis approach to identify the research trends and gaps in knowledge in the literature on ecological processes provided by animals in urban environments. We found a divide in urban ecological processes research that grouped studies into those with an explicit link to ecological processes and those that focused on biodiversity and made an implicit link to ecological processes. We also found that the dominant taxa in urban ecological processes research were insects, which has more than twice as many studies as birds or mammals, potentially due to their recognized and explicit link to key processes and services (e.g., pollination, pollution biomonitoring) and disservices (e.g., pests, disease transmission). We found a further split between terrestrial and aquatic studies, with urban aquatic studies also declining in relative prevalence over the last 20 yr. To consolidate and advance research on ecological processes in urban environments, we suggest it will be important to bridge the divide between studies on explicit services and others on more general biodiversity. This might be achieved by placing greater focus on the processes provided by non-insect taxa, and by integrating aquatic and terrestrial perspectives. © 2021 The Authors.
- Authors: Evans, Maldwyn , Barton, Philip , Westgate, Martin , Soga, Masashi , Fujita, Go , Miyashita, Tadashi
- Date: 2021
- Type: Text , Journal article
- Relation: Ecosphere Vol. 12, no. 8 (2021), p.
- Full Text:
- Reviewed:
- Description: Urbanization is increasing globally with wide-ranging consequences for biodiversity and the ecological processes it performs. Yet knowledge of the range of ecological processes supported by biodiversity in urban environments, and the different taxa that perform these processes is poorly understood. We used a text-analysis approach to identify the research trends and gaps in knowledge in the literature on ecological processes provided by animals in urban environments. We found a divide in urban ecological processes research that grouped studies into those with an explicit link to ecological processes and those that focused on biodiversity and made an implicit link to ecological processes. We also found that the dominant taxa in urban ecological processes research were insects, which has more than twice as many studies as birds or mammals, potentially due to their recognized and explicit link to key processes and services (e.g., pollination, pollution biomonitoring) and disservices (e.g., pests, disease transmission). We found a further split between terrestrial and aquatic studies, with urban aquatic studies also declining in relative prevalence over the last 20 yr. To consolidate and advance research on ecological processes in urban environments, we suggest it will be important to bridge the divide between studies on explicit services and others on more general biodiversity. This might be achieved by placing greater focus on the processes provided by non-insect taxa, and by integrating aquatic and terrestrial perspectives. © 2021 The Authors.
Favourable inland wetland conditions increase apparent survival of migratory shorebirds in Australia
- Clemens, Robert, Rogers, Danny, Minton, Clive, Rogers, Ken, Hansen, Birgita
- Authors: Clemens, Robert , Rogers, Danny , Minton, Clive , Rogers, Ken , Hansen, Birgita
- Date: 2021
- Type: Text , Journal article
- Relation: Emu Vol. 121, no. 3 (2021), p. 211-222
- Full Text:
- Reviewed:
- Description: Many migratory shorebird species using the East Asian–Australasian Flyway are declining rapidly. While the loss of staging habitats in East Asia is considered the primary cause, stressors to fitness often occur throughout the geographic range of declining species, and threats in the non-breeding grounds have been comparatively poorly studied. Three species of migratory shorebird, Curlew Sandpiper (Calidris ferruginea), Sharp-tailed Sandpiper (C. acuminata) and Red-necked Stint (C. ruficollis), use Australia’s dynamic temporary wetland systems opportunistically, yet these large wetland systems have become increasingly degraded, with reduced frequency and extent of flooding. Here, we test whether variables related to wetland availability in Australia’s interior can explain annual variation in apparent survival, abundance or immature to adult ratios at three well-monitored coastal shorebird areas in southern Australia (total area > 1315 km2). We show that coastal annual bird abundance and ratios of immatures at the coast were higher when inland Australia was relatively hot and dry. Also, a small but significant amount of variation in annual apparent survival can be explained by annual variation in inland conditions, with higher survival rates in years when inland conditions were relatively wet and cool. For the endangered Curlew Sandpiper, the impacts of Australian environmental conditions may be exacerbating the impacts of conditions experienced in other parts of its range on fitness and survival. While the effects we document here are relatively weak, they do suggest that management of inland wetlands for these shorebirds may positively affect survival rates of these sharply declining species. © 2021 BirdLife Australia. **Please note that there are multiple authors for this article therefore only the name of the first 5 including Federation University Australia affiliate “Birgita Hansen" is provided in this record**
Favourable inland wetland conditions increase apparent survival of migratory shorebirds in Australia
- Authors: Clemens, Robert , Rogers, Danny , Minton, Clive , Rogers, Ken , Hansen, Birgita
- Date: 2021
- Type: Text , Journal article
- Relation: Emu Vol. 121, no. 3 (2021), p. 211-222
- Full Text:
- Reviewed:
- Description: Many migratory shorebird species using the East Asian–Australasian Flyway are declining rapidly. While the loss of staging habitats in East Asia is considered the primary cause, stressors to fitness often occur throughout the geographic range of declining species, and threats in the non-breeding grounds have been comparatively poorly studied. Three species of migratory shorebird, Curlew Sandpiper (Calidris ferruginea), Sharp-tailed Sandpiper (C. acuminata) and Red-necked Stint (C. ruficollis), use Australia’s dynamic temporary wetland systems opportunistically, yet these large wetland systems have become increasingly degraded, with reduced frequency and extent of flooding. Here, we test whether variables related to wetland availability in Australia’s interior can explain annual variation in apparent survival, abundance or immature to adult ratios at three well-monitored coastal shorebird areas in southern Australia (total area > 1315 km2). We show that coastal annual bird abundance and ratios of immatures at the coast were higher when inland Australia was relatively hot and dry. Also, a small but significant amount of variation in annual apparent survival can be explained by annual variation in inland conditions, with higher survival rates in years when inland conditions were relatively wet and cool. For the endangered Curlew Sandpiper, the impacts of Australian environmental conditions may be exacerbating the impacts of conditions experienced in other parts of its range on fitness and survival. While the effects we document here are relatively weak, they do suggest that management of inland wetlands for these shorebirds may positively affect survival rates of these sharply declining species. © 2021 BirdLife Australia. **Please note that there are multiple authors for this article therefore only the name of the first 5 including Federation University Australia affiliate “Birgita Hansen" is provided in this record**
Strongyloides genotyping: a review of methods and application in public health and population genetics
- Bradbury, Richard, Pafčo, Barbora, Nosková, Eva, Hasegawa, Hideo
- Authors: Bradbury, Richard , Pafčo, Barbora , Nosková, Eva , Hasegawa, Hideo
- Date: 2021
- Type: Text , Journal article , Review
- Relation: International Journal for Parasitology Vol. 51, no. 13-14 (2021), p. 1153-1166
- Full Text:
- Reviewed:
- Description: Strongyloidiasis represents a major medical and veterinary helminthic disease. Human infection is caused by Strongyloides stercoralis, Strongyloides fuelleborni fuelleborni and Strongyloides fuelleborni kellyi, with S. stercoralis accounting for the majority of cases. Strongyloides f. fuelleborni likely represents a zoonosis acquired from non-human primates (NHPs), while no animal reservoir for S. f. kellyi infection has been found. Whether S. stercoralis represents a zoonosis acquired from dogs and cats remains unanswered. Over the past two decades various tools have been applied to genotype Strongyloides spp. The most commonly sequenced markers have been the hyper-variable regions I and IV of the 18S rRNA gene and selected portions of the cytochrome c oxidase subunit I gene. These markers have been sequenced and compared in Strongyloides from multiple hosts and geographical regions. More recently, a machine learning algorithm multi-locus sequence typing approach has been applied using these markers, while others have applied whole genome sequencing. Genotyping of Strongyloides from dogs, cats, NHPs and humans has identified that S. stercoralis likely originated in dogs and adapted to human hosts. It has also been demonstrated that S. stercoralis is distinct from S. f. fuelleborni and S. f. kellyi. Two distinct genetic clades of S. stercoralis exist, one restricted to dogs and another infecting humans, NHPs, dogs and cats. Genotyping of S. f. fuelleborni has identified two separate clades, one associated with African isolates and another Indochinese peninsular clade. This review summarises the history and development of genotyping tools for Strongyloides spp. It describes the findings of major studies to date in the context of the epidemiology and evolutionary biology of these helminths, with a specific focus on human-infecting species. © 2021 Australian Society for Parasitology
- Authors: Bradbury, Richard , Pafčo, Barbora , Nosková, Eva , Hasegawa, Hideo
- Date: 2021
- Type: Text , Journal article , Review
- Relation: International Journal for Parasitology Vol. 51, no. 13-14 (2021), p. 1153-1166
- Full Text:
- Reviewed:
- Description: Strongyloidiasis represents a major medical and veterinary helminthic disease. Human infection is caused by Strongyloides stercoralis, Strongyloides fuelleborni fuelleborni and Strongyloides fuelleborni kellyi, with S. stercoralis accounting for the majority of cases. Strongyloides f. fuelleborni likely represents a zoonosis acquired from non-human primates (NHPs), while no animal reservoir for S. f. kellyi infection has been found. Whether S. stercoralis represents a zoonosis acquired from dogs and cats remains unanswered. Over the past two decades various tools have been applied to genotype Strongyloides spp. The most commonly sequenced markers have been the hyper-variable regions I and IV of the 18S rRNA gene and selected portions of the cytochrome c oxidase subunit I gene. These markers have been sequenced and compared in Strongyloides from multiple hosts and geographical regions. More recently, a machine learning algorithm multi-locus sequence typing approach has been applied using these markers, while others have applied whole genome sequencing. Genotyping of Strongyloides from dogs, cats, NHPs and humans has identified that S. stercoralis likely originated in dogs and adapted to human hosts. It has also been demonstrated that S. stercoralis is distinct from S. f. fuelleborni and S. f. kellyi. Two distinct genetic clades of S. stercoralis exist, one restricted to dogs and another infecting humans, NHPs, dogs and cats. Genotyping of S. f. fuelleborni has identified two separate clades, one associated with African isolates and another Indochinese peninsular clade. This review summarises the history and development of genotyping tools for Strongyloides spp. It describes the findings of major studies to date in the context of the epidemiology and evolutionary biology of these helminths, with a specific focus on human-infecting species. © 2021 Australian Society for Parasitology
The puzzling falcomurus mandal (Collembola, orchesellidae, heteromurinae) : a review
- Bellini, Bruno, De Souza, Paolla, Greenslade, Penelope
- Authors: Bellini, Bruno , De Souza, Paolla , Greenslade, Penelope
- Date: 2021
- Type: Text , Journal article
- Relation: Insects Vol. 12, no. 7 (2021), p.
- Full Text:
- Reviewed:
- Description: Falcomurus Mandal is currently a monotypic genus of Heteromurinae described from India in 2018. Its key characters are the first antennal segment subdivided, the second undivided and the third annulated, the first abdominal segment lacking macrochaetae, and the presence of a sinuous modified macrochaeta on the proximal dens. Some details of its morphology were recently put in doubt, and so its genus status and affinities remain uncertain. Here, we revise the genus based on the type material of Dicranocentrus litoreus Mari-Mutt, as well as provide the description of two new species from Australian archipelagos and a reinterpretation of the chaetotaxy of Falcomurus chilikaensis Mandal and D. halophilus Mari-Mutt. After our revision, Falcomurus shows a well-conserved chaetotaxy and overall morphology, which allowed us to provide an updated generic diagnosis. While the antennae morphology of Falcomurus resembles that of Dicranocentrus Schött, its dorsal sensillar and macrochaetotaxy suggest it is closely related to HeteromurusWankel, as originally stated by Mandal. The main features useful to separate Falcomurus species are the head, mesothorax and fourth abdominal segment chaetotaxy. We also provide a key to its five species, a comparative table and notes on the affinities and distribution of Falcomurus. © 2021 by the authors.
- Authors: Bellini, Bruno , De Souza, Paolla , Greenslade, Penelope
- Date: 2021
- Type: Text , Journal article
- Relation: Insects Vol. 12, no. 7 (2021), p.
- Full Text:
- Reviewed:
- Description: Falcomurus Mandal is currently a monotypic genus of Heteromurinae described from India in 2018. Its key characters are the first antennal segment subdivided, the second undivided and the third annulated, the first abdominal segment lacking macrochaetae, and the presence of a sinuous modified macrochaeta on the proximal dens. Some details of its morphology were recently put in doubt, and so its genus status and affinities remain uncertain. Here, we revise the genus based on the type material of Dicranocentrus litoreus Mari-Mutt, as well as provide the description of two new species from Australian archipelagos and a reinterpretation of the chaetotaxy of Falcomurus chilikaensis Mandal and D. halophilus Mari-Mutt. After our revision, Falcomurus shows a well-conserved chaetotaxy and overall morphology, which allowed us to provide an updated generic diagnosis. While the antennae morphology of Falcomurus resembles that of Dicranocentrus Schött, its dorsal sensillar and macrochaetotaxy suggest it is closely related to HeteromurusWankel, as originally stated by Mandal. The main features useful to separate Falcomurus species are the head, mesothorax and fourth abdominal segment chaetotaxy. We also provide a key to its five species, a comparative table and notes on the affinities and distribution of Falcomurus. © 2021 by the authors.
A DNA toolbox for non-invasive genetic studies of sambar deer (Rusa unicolor)
- Davies, Chris, Wright, Wendy, Wedrowicz, Faye, Hogan, Fiona
- Authors: Davies, Chris , Wright, Wendy , Wedrowicz, Faye , Hogan, Fiona
- Date: 2020
- Type: Text , Journal article
- Relation: Australian Mammalogy Vol. 42, no. 1 (2020), p. 58-66
- Full Text:
- Reviewed:
- Description: Invasive sambar deer (Rusa unicolor) are having significant detrimental impacts on natural environments in south-eastern Australia. Little, however, is known about their ecology, limiting evidence-based management strategies directed at reducing deer impacts. Genetic data, generated from DNA isolated from deer scats, can be used to fill ecological knowledge gaps. This study outlines a non-invasive genetic sampling strategy by which good-quality DNA from a single deer scat can be used to determine (1) species of origin, (2) sex and (3) a unique DNA profile. DNA from deer tissue and sambar deer scat samples were used to develop and optimise molecular methods to collect reliable genetic information. A DNA toolbox is presented that describes how to find, collect and store scat samples, isolate DNA and use molecular markers to generate informative genetic data. Generating genetic data using this approach will support studies aimed at acquiring ecological knowledge about sambar deer. Such knowledge will be critical for developing evidence-based recommendations to improve on-ground management decisions for sambar deer.
- Authors: Davies, Chris , Wright, Wendy , Wedrowicz, Faye , Hogan, Fiona
- Date: 2020
- Type: Text , Journal article
- Relation: Australian Mammalogy Vol. 42, no. 1 (2020), p. 58-66
- Full Text:
- Reviewed:
- Description: Invasive sambar deer (Rusa unicolor) are having significant detrimental impacts on natural environments in south-eastern Australia. Little, however, is known about their ecology, limiting evidence-based management strategies directed at reducing deer impacts. Genetic data, generated from DNA isolated from deer scats, can be used to fill ecological knowledge gaps. This study outlines a non-invasive genetic sampling strategy by which good-quality DNA from a single deer scat can be used to determine (1) species of origin, (2) sex and (3) a unique DNA profile. DNA from deer tissue and sambar deer scat samples were used to develop and optimise molecular methods to collect reliable genetic information. A DNA toolbox is presented that describes how to find, collect and store scat samples, isolate DNA and use molecular markers to generate informative genetic data. Generating genetic data using this approach will support studies aimed at acquiring ecological knowledge about sambar deer. Such knowledge will be critical for developing evidence-based recommendations to improve on-ground management decisions for sambar deer.
Evidence for cryptic diversity in the “pan-antarctic” springtail friesea antarctica and the description of two new species
- Carapelli, Antonio, Greenslade, Penelope, Nardi, Francesco, Leo, Chiara, Convey, Peter, Frati, Francesco, Fanciulli, Paolo
- Authors: Carapelli, Antonio , Greenslade, Penelope , Nardi, Francesco , Leo, Chiara , Convey, Peter , Frati, Francesco , Fanciulli, Paolo
- Date: 2020
- Type: Text , Journal article
- Relation: Insects Vol. 11, no. 3 (2020), p.
- Full Text:
- Reviewed:
- Description: The invertebrate terrestrial fauna of Antarctica is being investigated with increasing interest to discover how life interacts with the extreme polar environment and how millions of years of evolution have shaped their biodiversity. Classical taxonomic approaches, complemented by molecular tools, are improving our understanding of the systematic relationships of some species, changing the nomenclature of taxa and challenging the taxonomic status of others. The springtail Friesea grisea has previously been described as the only species with a “pan-Antarctic” distribution. However, recent genetic comparisons have pointed to another scenario. The latest morphological study has confined F. grisea to the sub-Antarctic island of South Georgia, from which it was originally described, and resurrected F. antarctica as a congeneric species occurring on the continental mainland. Molecular data demonstrate that populations of this taxon, ostensibly occurring across Maritime and Continental Antarctica, as well as on some offshore islands, are evolutionarily isolated and divergent and cannot be included within a single species. The present study, combining morphological with molecular data, attempts to validate this hypothesis and challenges the taxonomic status of F. antarctica, suggesting that two additional new species, described here as Friesea gretae sp. nov. and Friesea propria sp. nov., are present in Continental Antarctica. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.
- Authors: Carapelli, Antonio , Greenslade, Penelope , Nardi, Francesco , Leo, Chiara , Convey, Peter , Frati, Francesco , Fanciulli, Paolo
- Date: 2020
- Type: Text , Journal article
- Relation: Insects Vol. 11, no. 3 (2020), p.
- Full Text:
- Reviewed:
- Description: The invertebrate terrestrial fauna of Antarctica is being investigated with increasing interest to discover how life interacts with the extreme polar environment and how millions of years of evolution have shaped their biodiversity. Classical taxonomic approaches, complemented by molecular tools, are improving our understanding of the systematic relationships of some species, changing the nomenclature of taxa and challenging the taxonomic status of others. The springtail Friesea grisea has previously been described as the only species with a “pan-Antarctic” distribution. However, recent genetic comparisons have pointed to another scenario. The latest morphological study has confined F. grisea to the sub-Antarctic island of South Georgia, from which it was originally described, and resurrected F. antarctica as a congeneric species occurring on the continental mainland. Molecular data demonstrate that populations of this taxon, ostensibly occurring across Maritime and Continental Antarctica, as well as on some offshore islands, are evolutionarily isolated and divergent and cannot be included within a single species. The present study, combining morphological with molecular data, attempts to validate this hypothesis and challenges the taxonomic status of F. antarctica, suggesting that two additional new species, described here as Friesea gretae sp. nov. and Friesea propria sp. nov., are present in Continental Antarctica. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.
The rare richardsitas betsch (collembola, symphypleona, sminthuridae) : a new species from Australia with comments on the genus and on the sminthurinae
- Medeiros, Gleyce, Greenslade, Penelope, Bellini, Bruno
- Authors: Medeiros, Gleyce , Greenslade, Penelope , Bellini, Bruno
- Date: 2020
- Type: Text , Journal article
- Relation: Insects Vol. 11, no. 8 (2020), p. 1-16
- Full Text:
- Reviewed:
- Description: Richardsitas Betsch is a small genus of Sminthurinae with only two species described so far, both from Madagascar. It resembles other Sminthurinae with long antennae, especially Temeritas Richards. Here we provide the first record of Richardsitas from Australia, Richardsitas subferoleum sp. nov., which is similar to R. najtae Betsch and R. griveaudi Betsch in males’ large abdomen chaetotaxy and presence of tenent-hairs on tibiotarsi II–III, but lacks mucronal chaeta and has 28 segments on the fourth antennal segment plus a unique pair of sensilla on the second. We also provide an updated genus diagnosis to Richardsitas, a key to its species, a discussion of the affinities of Temeritas and Richardsitas to other Sminthurinae, and an updated key to this subfamily. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.
- Description: This research was supported by UFRN. B.C.B. was granted by CAPES and CNPq (PROTAX II, process #156828/2016-01 and PQ2018, process # 305426/2018-4, respectively); G.S.M. was granted by CAPES (Master scholarship).
- Authors: Medeiros, Gleyce , Greenslade, Penelope , Bellini, Bruno
- Date: 2020
- Type: Text , Journal article
- Relation: Insects Vol. 11, no. 8 (2020), p. 1-16
- Full Text:
- Reviewed:
- Description: Richardsitas Betsch is a small genus of Sminthurinae with only two species described so far, both from Madagascar. It resembles other Sminthurinae with long antennae, especially Temeritas Richards. Here we provide the first record of Richardsitas from Australia, Richardsitas subferoleum sp. nov., which is similar to R. najtae Betsch and R. griveaudi Betsch in males’ large abdomen chaetotaxy and presence of tenent-hairs on tibiotarsi II–III, but lacks mucronal chaeta and has 28 segments on the fourth antennal segment plus a unique pair of sensilla on the second. We also provide an updated genus diagnosis to Richardsitas, a key to its species, a discussion of the affinities of Temeritas and Richardsitas to other Sminthurinae, and an updated key to this subfamily. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.
- Description: This research was supported by UFRN. B.C.B. was granted by CAPES and CNPq (PROTAX II, process #156828/2016-01 and PQ2018, process # 305426/2018-4, respectively); G.S.M. was granted by CAPES (Master scholarship).
Managing human-tiger conflict : Lessons from Bardia and Chitwan National Parks, Nepal
- Bhattarai, Babu, Wright, Wendy, Morgan, Damian, Cook, Simon, Baral, Hem
- Authors: Bhattarai, Babu , Wright, Wendy , Morgan, Damian , Cook, Simon , Baral, Hem
- Date: 2019
- Type: Text , Journal article , Review
- Relation: European Journal of Wildlife Research Vol. 65, no. 3 (2019), p. 1-12
- Full Text:
- Reviewed:
- Description: Successful conservation outcomes for the tiger (Panthera tigris) have been achieved in Nepalese protected areas. However, an unwelcome consequence of greater tiger numbers is the increased prevalence of human-tiger conflict (HTC), particularly in buffer zone areas adjacent to key tiger reserves, which are heavily utilised by farming communities. HTC events may manifest as attacks by tigers on livestock or people, or as people harming tigers. Since 1994, 12 and 99 fatal tiger attacks on people were reported in and near Bardia and Chitwan National Parks, respectively; and since 1979, 34 tigers from these Parks have been killed due to HTC. HTC presents major threats to local people and to the continuing success of tiger conservation programmes. Conservation authorities in Nepal are implementing innovative solutions to prevent and mitigate HTC. These include financial compensation for damage caused by tigers and locally based community projects and programmes focussed on changing livestock husbandry practises, raising awareness of tiger ecology among local residents and supporting families to reduce their reliance on park resources. While these approaches have been successful in mitigating HTC and its effects in Nepal, further developments and refinements are required. This paper provides a synthesis of published and unpublished reports of HTC, in order to demonstrate the magnitude of the problem faced in Nepal. A critical summary of current management practises adopted in two of Nepal’s key tiger reserves is intended to provide a tool for managers to target their efforts towards methods likely to achieve success.
- Authors: Bhattarai, Babu , Wright, Wendy , Morgan, Damian , Cook, Simon , Baral, Hem
- Date: 2019
- Type: Text , Journal article , Review
- Relation: European Journal of Wildlife Research Vol. 65, no. 3 (2019), p. 1-12
- Full Text:
- Reviewed:
- Description: Successful conservation outcomes for the tiger (Panthera tigris) have been achieved in Nepalese protected areas. However, an unwelcome consequence of greater tiger numbers is the increased prevalence of human-tiger conflict (HTC), particularly in buffer zone areas adjacent to key tiger reserves, which are heavily utilised by farming communities. HTC events may manifest as attacks by tigers on livestock or people, or as people harming tigers. Since 1994, 12 and 99 fatal tiger attacks on people were reported in and near Bardia and Chitwan National Parks, respectively; and since 1979, 34 tigers from these Parks have been killed due to HTC. HTC presents major threats to local people and to the continuing success of tiger conservation programmes. Conservation authorities in Nepal are implementing innovative solutions to prevent and mitigate HTC. These include financial compensation for damage caused by tigers and locally based community projects and programmes focussed on changing livestock husbandry practises, raising awareness of tiger ecology among local residents and supporting families to reduce their reliance on park resources. While these approaches have been successful in mitigating HTC and its effects in Nepal, further developments and refinements are required. This paper provides a synthesis of published and unpublished reports of HTC, in order to demonstrate the magnitude of the problem faced in Nepal. A critical summary of current management practises adopted in two of Nepal’s key tiger reserves is intended to provide a tool for managers to target their efforts towards methods likely to achieve success.
Wild Australian birds and drug-resistant bacteria : Characterisation of antibiotic-resistant Escherichia coli and Enterococcus spp
- Smith, Hannah, Clarke, Rohan, Larkins, Jo-Ann, Bean, David, Greenhill, Andrew
- Authors: Smith, Hannah , Clarke, Rohan , Larkins, Jo-Ann , Bean, David , Greenhill, Andrew
- Date: 2019
- Type: Text , Journal article
- Relation: Emu-Austral Ornithology Vol. 119, no. 4 (2019), p. 384-390
- Full Text:
- Reviewed:
- Description: Birds can spread microorganisms through their movement; however, it is still not fully understood how wild birds acquire and disperse antimicrobial-resistant (AMR) bacteria. We sampled wild Australian birds from three geographically distinct locations for the presence of AMR strains of two clinically important species of bacteria, Escherichia coli and Enterococcus spp. A total of 121 birds were sampled, representing 15 different species. Thirty E. coli and 54 Enterococcus isolates were tested for resistance to 12 and 8 different antibiotics, respectively. Resistance to at least one antibiotic was common, being detected in 96% of Enterococcus and 60% of E. coli isolates. The vancomycin-resistance genes vanA and vanD were detected in 22% of enterococci (13% vanA, 9% vanD), while 9% displayed phenotypic resistance with no associated gene. Wild birds are a carrier of AMR bacteria in Australia, and are capable of harbouring a more diverse range of vancomycin-resistance genes than is typically seen among Australian clinical isolates.
- Authors: Smith, Hannah , Clarke, Rohan , Larkins, Jo-Ann , Bean, David , Greenhill, Andrew
- Date: 2019
- Type: Text , Journal article
- Relation: Emu-Austral Ornithology Vol. 119, no. 4 (2019), p. 384-390
- Full Text:
- Reviewed:
- Description: Birds can spread microorganisms through their movement; however, it is still not fully understood how wild birds acquire and disperse antimicrobial-resistant (AMR) bacteria. We sampled wild Australian birds from three geographically distinct locations for the presence of AMR strains of two clinically important species of bacteria, Escherichia coli and Enterococcus spp. A total of 121 birds were sampled, representing 15 different species. Thirty E. coli and 54 Enterococcus isolates were tested for resistance to 12 and 8 different antibiotics, respectively. Resistance to at least one antibiotic was common, being detected in 96% of Enterococcus and 60% of E. coli isolates. The vancomycin-resistance genes vanA and vanD were detected in 22% of enterococci (13% vanA, 9% vanD), while 9% displayed phenotypic resistance with no associated gene. Wild birds are a carrier of AMR bacteria in Australia, and are capable of harbouring a more diverse range of vancomycin-resistance genes than is typically seen among Australian clinical isolates.
Autumn food habits of the brown bear Ursus arctos in the Golestan National Park : A pilot study in Iran
- Soofi, Mahmood, Qashqaei, Ali, Aryal, Achyut, Coogan, Sean
- Authors: Soofi, Mahmood , Qashqaei, Ali , Aryal, Achyut , Coogan, Sean
- Date: 2018
- Type: Text , Journal article
- Relation: Mammalia Vol. 82, no. 4 (2018), p. 338-342
- Full Text:
- Reviewed:
- Description: Food consumed by brown bears in the Golestan National Park in Iran was analyzed during autumn 2011. We identified 22 food items in 61 scats, with the most important food items being hawthorn fruit, cherry plum fruit and chestnut-leaved oak hard mast, based on importance value (IV) estimates of 26.4%, 18.1% and 12.9%, respectively. The overall bear diet (percent digestible dry matter) was composed of 77.9% soft mast (i.e. fruit), 21.3% hard mast and small proportions of other vegetation (0.3%) or animal matter (0.4%). One anthropogenic food was identified (vine grape) and was of minor importance (IV=0.2%).
- Authors: Soofi, Mahmood , Qashqaei, Ali , Aryal, Achyut , Coogan, Sean
- Date: 2018
- Type: Text , Journal article
- Relation: Mammalia Vol. 82, no. 4 (2018), p. 338-342
- Full Text:
- Reviewed:
- Description: Food consumed by brown bears in the Golestan National Park in Iran was analyzed during autumn 2011. We identified 22 food items in 61 scats, with the most important food items being hawthorn fruit, cherry plum fruit and chestnut-leaved oak hard mast, based on importance value (IV) estimates of 26.4%, 18.1% and 12.9%, respectively. The overall bear diet (percent digestible dry matter) was composed of 77.9% soft mast (i.e. fruit), 21.3% hard mast and small proportions of other vegetation (0.3%) or animal matter (0.4%). One anthropogenic food was identified (vine grape) and was of minor importance (IV=0.2%).
Conspectus of Australian Brachystomellidae (Collembola) with description of new species of Rapoportella and redescription of Cassagnella anomala
- Authors: Greenslade, Penelope
- Date: 2018
- Type: Text , Journal article
- Relation: European Journal of Entomology Vol. 115, no. 1 (2018), p. 117-126
- Full Text:
- Reviewed:
- Description: As part of a modern review of all Australian Collembola families, a key is provided to the nine genera of Brachystomellidae currently known from Australia, their morphology is compared, their distribution within and outside Australia is noted and the high diversity of genera in southern regions emphasised. Three Australian genera are endemic, five are also found in South America, South Africa and/or New Zealand and one has a cosmopolitan distribution. The distribution, ecology and habitat preferences of Australian genera are compared. Two genera, Cassagnella Najt & Massoud and Rapoportella Ellis & Bellinger, are newly diagnosed and additions to the description of C. anomala Womersley are given. Australian Cassagnella species appear restricted to southern, humid regions and C. anomala possesses some characters that indicate it is adapted to living in habitats that are periodically flooded. A new species, Rapoportella edwardi sp. n. is described in the rarer genus from drier eucalypt forests. The effect of agricultural practices on an introduced species of Brachystomella is noted and its indicator value emphasised. Possible threats to the endemic genera and species are noted.
- Authors: Greenslade, Penelope
- Date: 2018
- Type: Text , Journal article
- Relation: European Journal of Entomology Vol. 115, no. 1 (2018), p. 117-126
- Full Text:
- Reviewed:
- Description: As part of a modern review of all Australian Collembola families, a key is provided to the nine genera of Brachystomellidae currently known from Australia, their morphology is compared, their distribution within and outside Australia is noted and the high diversity of genera in southern regions emphasised. Three Australian genera are endemic, five are also found in South America, South Africa and/or New Zealand and one has a cosmopolitan distribution. The distribution, ecology and habitat preferences of Australian genera are compared. Two genera, Cassagnella Najt & Massoud and Rapoportella Ellis & Bellinger, are newly diagnosed and additions to the description of C. anomala Womersley are given. Australian Cassagnella species appear restricted to southern, humid regions and C. anomala possesses some characters that indicate it is adapted to living in habitats that are periodically flooded. A new species, Rapoportella edwardi sp. n. is described in the rarer genus from drier eucalypt forests. The effect of agricultural practices on an introduced species of Brachystomella is noted and its indicator value emphasised. Possible threats to the endemic genera and species are noted.
Reduced gene flow in a vulnerable species reflects two centuries of habitat loss and fragmentation
- Stevens, Kate, Harrisson, Katherine, Hogan, Fiona, Cooke, Raylene, Clarke, Rohan
- Authors: Stevens, Kate , Harrisson, Katherine , Hogan, Fiona , Cooke, Raylene , Clarke, Rohan
- Date: 2018
- Type: Text , Journal article
- Relation: Ecosphere Vol. 9, no. 2 (2018), p. 1-15
- Full Text:
- Reviewed:
- Description: Understanding the effects of landscape modification on gene flow of fauna is central to informing conservation strategies that promote functional landscape connectivity and population persistence. We explored the effects of large-scale habitat loss and fragmentation on spatial and temporal patterns of gene flow in a threatened Australian woodland bird: the Grey-crowned Babbler Pomatostomus temporalis. Using microsatellite data, we (1) investigated historical (i.e., pre-fragmentation) and contemporary (i.e., post-fragmentation) levels of gene flow among subpopulations and/or regions, (2) identified first-generation migrants and likely dispersal events, (3) tested for signatures of genetic bottlenecks, (4) estimated contemporary and historical effective population sizes, and (5) explored the relative influences of drift and migration in shaping contemporary population structure. Results indicated that the functional connectivity of landscapes used by the Grey-crowned Babbler is severely compromised in the study area. The proportion of individuals that were recent immigrants among all subpopulations were low. Habitat fragmentation has led to a clear division between subpopulations in the east and west, and the patterns of gene flow exchange between these two regions have changed over time. The effective population size estimates for these two regions are now well below that required for long-term population viability (Ne < 100). Demographic history models indicate that genetic drift was a greater influence on subpopulations than gene flow, and most subpopulations show signatures of bottlenecks. Translocations to promote gene flow and boost genetic diversity in the short term and targeted habitat restoration to improve landscape functional connectivity in the long term represent promising conservation management strategies that will likely have benefits for many other woodland bird species. © 2018 Stevens et al.
- Authors: Stevens, Kate , Harrisson, Katherine , Hogan, Fiona , Cooke, Raylene , Clarke, Rohan
- Date: 2018
- Type: Text , Journal article
- Relation: Ecosphere Vol. 9, no. 2 (2018), p. 1-15
- Full Text:
- Reviewed:
- Description: Understanding the effects of landscape modification on gene flow of fauna is central to informing conservation strategies that promote functional landscape connectivity and population persistence. We explored the effects of large-scale habitat loss and fragmentation on spatial and temporal patterns of gene flow in a threatened Australian woodland bird: the Grey-crowned Babbler Pomatostomus temporalis. Using microsatellite data, we (1) investigated historical (i.e., pre-fragmentation) and contemporary (i.e., post-fragmentation) levels of gene flow among subpopulations and/or regions, (2) identified first-generation migrants and likely dispersal events, (3) tested for signatures of genetic bottlenecks, (4) estimated contemporary and historical effective population sizes, and (5) explored the relative influences of drift and migration in shaping contemporary population structure. Results indicated that the functional connectivity of landscapes used by the Grey-crowned Babbler is severely compromised in the study area. The proportion of individuals that were recent immigrants among all subpopulations were low. Habitat fragmentation has led to a clear division between subpopulations in the east and west, and the patterns of gene flow exchange between these two regions have changed over time. The effective population size estimates for these two regions are now well below that required for long-term population viability (Ne < 100). Demographic history models indicate that genetic drift was a greater influence on subpopulations than gene flow, and most subpopulations show signatures of bottlenecks. Translocations to promote gene flow and boost genetic diversity in the short term and targeted habitat restoration to improve landscape functional connectivity in the long term represent promising conservation management strategies that will likely have benefits for many other woodland bird species. © 2018 Stevens et al.
The activities of generalist parasitoids can be segregated between crop and adjacent non-crop habitats
- Feng, Yi, Kravchuk, Olena, Sandhu, Harpinder, Wratten, Stephen, Keller, Michael
- Authors: Feng, Yi , Kravchuk, Olena , Sandhu, Harpinder , Wratten, Stephen , Keller, Michael
- Date: 2017
- Type: Text , Journal article
- Relation: Journal of Pest Science Vol. 90, no. 1 (2017), p. 275-286
- Full Text:
- Reviewed:
- Description: Non-crop habitat adjacent to crops may be important for enhancing the activity of natural enemies in crops. However, it is not always clear whether natural enemies that are active in non-crop habitats actually contribute to pest suppression in adjacent crop habitats. We hypothesised that parasitic wasps that utilise the same hosts can be segregated between crop and non-crop habitats in an agro-ecosystem. We tested this hypothesis using the light brown apple moth, Epiphyas postvittana (Walker) (Lepidoptera: Tortricidae), in vineyards and adjacent native vegetation. We experimentally measured the parasitism rate of larval E. postvittana at six and eight sites in both vineyards and the adjacent native vegetation in two consecutive years. Wild larval Tortricidae were also collected at each experimental site to assess their diversity and related parasitoids. Parasitised hosts were then identified using a PCR-based protocol to examine the parasitoids’ host ranges. The parasitoid Therophilus unimaculatus (Turner) (Hymenoptera: Braconidae) was most active in non-crop native vegetation, whereas Dolichogenidea tasmanica (Cameron) (Hymenoptera: Braconidae) parasitised the most larvae in vineyards. Parasitism of E. postvittana by D. tasmanica was higher on grape than on plantain, which indicates that host plants influence activities in different habitat. Both species shared the same range of tortricid hosts. Overall, our results indicate the two key parasitoids that attack E. postvittana differ in their pattern of habitat use. The native vegetation adjacent to crops may not enhance the activity of some natural enemies for pest control in an agricultural ecosystem. © 2016, Springer-Verlag Berlin Heidelberg.
- Authors: Feng, Yi , Kravchuk, Olena , Sandhu, Harpinder , Wratten, Stephen , Keller, Michael
- Date: 2017
- Type: Text , Journal article
- Relation: Journal of Pest Science Vol. 90, no. 1 (2017), p. 275-286
- Full Text:
- Reviewed:
- Description: Non-crop habitat adjacent to crops may be important for enhancing the activity of natural enemies in crops. However, it is not always clear whether natural enemies that are active in non-crop habitats actually contribute to pest suppression in adjacent crop habitats. We hypothesised that parasitic wasps that utilise the same hosts can be segregated between crop and non-crop habitats in an agro-ecosystem. We tested this hypothesis using the light brown apple moth, Epiphyas postvittana (Walker) (Lepidoptera: Tortricidae), in vineyards and adjacent native vegetation. We experimentally measured the parasitism rate of larval E. postvittana at six and eight sites in both vineyards and the adjacent native vegetation in two consecutive years. Wild larval Tortricidae were also collected at each experimental site to assess their diversity and related parasitoids. Parasitised hosts were then identified using a PCR-based protocol to examine the parasitoids’ host ranges. The parasitoid Therophilus unimaculatus (Turner) (Hymenoptera: Braconidae) was most active in non-crop native vegetation, whereas Dolichogenidea tasmanica (Cameron) (Hymenoptera: Braconidae) parasitised the most larvae in vineyards. Parasitism of E. postvittana by D. tasmanica was higher on grape than on plantain, which indicates that host plants influence activities in different habitat. Both species shared the same range of tortricid hosts. Overall, our results indicate the two key parasitoids that attack E. postvittana differ in their pattern of habitat use. The native vegetation adjacent to crops may not enhance the activity of some natural enemies for pest control in an agricultural ecosystem. © 2016, Springer-Verlag Berlin Heidelberg.
Continental-scale decreases in shorebird populations in Australia
- Clemens, Robert, Rogers, Danny, Hansen, Birgita, Gosbell, Ken, Minton, Clive, Straw, Phil, Bamford, Mike, Woehler, Eric, Milton, David, Weston, Michael, Venables, Bill, Weller, Dan, Hassell, Chris, Rutherford, Bill, Onton, Kimberly, Herrod, Ashley, Studds, Colin, Choi, Chi-Yeung, Dhanjal-Adams, Kiran, Murray, Nicholas, Skilleter, Gregory, Fuller, Richard
- Authors: Clemens, Robert , Rogers, Danny , Hansen, Birgita , Gosbell, Ken , Minton, Clive , Straw, Phil , Bamford, Mike , Woehler, Eric , Milton, David , Weston, Michael , Venables, Bill , Weller, Dan , Hassell, Chris , Rutherford, Bill , Onton, Kimberly , Herrod, Ashley , Studds, Colin , Choi, Chi-Yeung , Dhanjal-Adams, Kiran , Murray, Nicholas , Skilleter, Gregory , Fuller, Richard
- Date: 2016
- Type: Text , Journal article
- Relation: Emu Vol. 116, no. 2 (2016), p. 119-135
- Full Text:
- Reviewed:
- Description: Decreases in shorebird populations are increasingly evident worldwide, especially in the East Asian-Australasian Flyway (EAAF). To arrest these declines, it is important to understand the scale of both the problem and the solutions. We analysed an expansive Australian citizen-science dataset, spanning the period 1973 to 2014, to explore factors related to differences in trends among shorebird populations in wetlands throughout Australia. Of seven resident Australian shorebird species, the four inland species exhibited continental decreases, whereas the three coastal species did not. Decreases in inland resident shorebirds were related to changes in availability of water at non-tidal wetlands, suggesting that degradation of wetlands in Australia's interior is playing a role in these declines. For migratory shorebirds, the analyses revealed continental decreases in abundance in 12 of 19 species, and decreases in 17 of 19 in the southern half of Australia over the past 15 years. Many trends were strongly associated with continental gradients in latitude or longitude, suggesting some large-scale patterns in the decreases, with steeper declines often evident in southern Australia. After accounting for this effect, local variables did not explain variation in migratory shorebird trends between sites. Our results are consistent with other studies indicating that decreases in migratory shorebird populations in the EAAF are most likely being driven primarily by factors outside Australia. This reinforces the need for urgent overseas conservation actions. However, substantially heterogeneous trends within Australia, combined with declines of inland resident shorebirds indicate effective management of Australian shorebird habitat remains important. © BirdLife Australia 2016.
- Authors: Clemens, Robert , Rogers, Danny , Hansen, Birgita , Gosbell, Ken , Minton, Clive , Straw, Phil , Bamford, Mike , Woehler, Eric , Milton, David , Weston, Michael , Venables, Bill , Weller, Dan , Hassell, Chris , Rutherford, Bill , Onton, Kimberly , Herrod, Ashley , Studds, Colin , Choi, Chi-Yeung , Dhanjal-Adams, Kiran , Murray, Nicholas , Skilleter, Gregory , Fuller, Richard
- Date: 2016
- Type: Text , Journal article
- Relation: Emu Vol. 116, no. 2 (2016), p. 119-135
- Full Text:
- Reviewed:
- Description: Decreases in shorebird populations are increasingly evident worldwide, especially in the East Asian-Australasian Flyway (EAAF). To arrest these declines, it is important to understand the scale of both the problem and the solutions. We analysed an expansive Australian citizen-science dataset, spanning the period 1973 to 2014, to explore factors related to differences in trends among shorebird populations in wetlands throughout Australia. Of seven resident Australian shorebird species, the four inland species exhibited continental decreases, whereas the three coastal species did not. Decreases in inland resident shorebirds were related to changes in availability of water at non-tidal wetlands, suggesting that degradation of wetlands in Australia's interior is playing a role in these declines. For migratory shorebirds, the analyses revealed continental decreases in abundance in 12 of 19 species, and decreases in 17 of 19 in the southern half of Australia over the past 15 years. Many trends were strongly associated with continental gradients in latitude or longitude, suggesting some large-scale patterns in the decreases, with steeper declines often evident in southern Australia. After accounting for this effect, local variables did not explain variation in migratory shorebird trends between sites. Our results are consistent with other studies indicating that decreases in migratory shorebird populations in the EAAF are most likely being driven primarily by factors outside Australia. This reinforces the need for urgent overseas conservation actions. However, substantially heterogeneous trends within Australia, combined with declines of inland resident shorebirds indicate effective management of Australian shorebird habitat remains important. © BirdLife Australia 2016.
Metabolic profiling and in vitro assessment of anthelmintic fractions of Picria fel-terrae Lour
- Kumarasingha, Rasika, Karpe, Avinash, Preston, Sarah, Yeo, Tiong-Chia, Lim, Diana, Tu, Chu-Lee, Luu, Jennii, Simpson, Kaylene, Shaw, Jillian, Gasser, Robin, Beale, David, Morrison, Paul, Palombo, Enzo, Boag, Peter
- Authors: Kumarasingha, Rasika , Karpe, Avinash , Preston, Sarah , Yeo, Tiong-Chia , Lim, Diana , Tu, Chu-Lee , Luu, Jennii , Simpson, Kaylene , Shaw, Jillian , Gasser, Robin , Beale, David , Morrison, Paul , Palombo, Enzo , Boag, Peter
- Date: 2016
- Type: Text , Journal article
- Relation: International Journal for Parasitology: Drugs and Drug Resistance Vol. 6, no. 3 (2016), p. 171-178
- Full Text:
- Reviewed:
- Description: Anthelmintic resistance is widespread in gastrointestinal nematode populations, such that there is a consistent need to search for new anthelmintics. However, the cost of screening for new compounds is high and has a very low success rate. Using the knowledge of traditional healers from Borneo Rainforests (Sarawak, Malaysia), we have previously shown that some traditional medicinal plants are a rich source of potential new anthelmintic drug candidates. In this study, Picria fel-terrae Lour. plant extract, which has previously shown promising anthelmintic activities, was fractionated via the use of a solid phase extraction cartridge and each isolated fraction was then tested on free-living nematode Caenorhabditis elegans and the parasitic nematode Haemonchus contortus. We found that a single fraction was enriched for nematocidal activity, killing ≥90% of C. elegans adults and inhibiting the motility of exsheathed L3 of H. contortus, while having minimal cytotoxic activity in mammalian cell culture. Metabolic profiling and chemometric analysis of the effective fraction indicated medium chained fatty acids and phenolic acids were highly represented. Image 1 •Chemical fractionation of Picria fel-terrae Lour. plant extract.•Anthelmintic activity against Caenorhabditis elegans and Haemonchus contortus.•Metabolic profiling and chemometric analysis of active fraction.•Active fraction has minimal mammalian cytotoxicity.
- Authors: Kumarasingha, Rasika , Karpe, Avinash , Preston, Sarah , Yeo, Tiong-Chia , Lim, Diana , Tu, Chu-Lee , Luu, Jennii , Simpson, Kaylene , Shaw, Jillian , Gasser, Robin , Beale, David , Morrison, Paul , Palombo, Enzo , Boag, Peter
- Date: 2016
- Type: Text , Journal article
- Relation: International Journal for Parasitology: Drugs and Drug Resistance Vol. 6, no. 3 (2016), p. 171-178
- Full Text:
- Reviewed:
- Description: Anthelmintic resistance is widespread in gastrointestinal nematode populations, such that there is a consistent need to search for new anthelmintics. However, the cost of screening for new compounds is high and has a very low success rate. Using the knowledge of traditional healers from Borneo Rainforests (Sarawak, Malaysia), we have previously shown that some traditional medicinal plants are a rich source of potential new anthelmintic drug candidates. In this study, Picria fel-terrae Lour. plant extract, which has previously shown promising anthelmintic activities, was fractionated via the use of a solid phase extraction cartridge and each isolated fraction was then tested on free-living nematode Caenorhabditis elegans and the parasitic nematode Haemonchus contortus. We found that a single fraction was enriched for nematocidal activity, killing ≥90% of C. elegans adults and inhibiting the motility of exsheathed L3 of H. contortus, while having minimal cytotoxic activity in mammalian cell culture. Metabolic profiling and chemometric analysis of the effective fraction indicated medium chained fatty acids and phenolic acids were highly represented. Image 1 •Chemical fractionation of Picria fel-terrae Lour. plant extract.•Anthelmintic activity against Caenorhabditis elegans and Haemonchus contortus.•Metabolic profiling and chemometric analysis of active fraction.•Active fraction has minimal mammalian cytotoxicity.
Synonymy of Katianna coeruleocephala Handschin, 1920 (Collembola: Katiannidae) with Bourletiella viridescens (Bourletiellidae)
- Authors: Greenslade, Penelope
- Date: 2016
- Type: Text , Journal article
- Relation: Zootaxa Vol. 4066, no. 1 (2016), p. 78-80
- Full Text:
- Reviewed:
- Description: Katianna coeruleocephala was described by Handschin in 1920 from Poespo, Java. It was collected in December, 1896 by Dr. Zehntner with the collecting details given as rotten "Louv" (leaves?) from live orchard. Handschin (1920) labelled his figures of the species (p. 146) as Katianna coerulescephala but the first spelling of the species name (p. 145) has priority. Katianna coeruleocephala has never been recollected. The only mention of the species in the literature since 1920 has been by Suhardjono (1989) in a check list for Indonesia and Suhardjono (2012) who listed it as present on Java and provided the main characteristics of the genus Katianna Börner, 1923. She stated it was a "new" (translate as endemic?) species in Java with a preferred habitat in cold and damp litter but no comment was made on the taxonomic status of the Indonesian species. There has previously been some doubt over both the original generic and family designation given by Handschin in 1920 for the species by both Yoshii (pers. comm.) and Murphy (pers. comm.) who believed it was "likely to belong to the family Bourletiellidae". They did not examine the holotype but based their comments on Handschin's (1920) figure of the mucro which shows it having fairly broad and smooth inner and outer lamellae (Fig. 5). The genus Katianna always has one, the inner, lateral lamella, distinctly toothed. The holotype and single specimen from the Basle Museum of Natural History has been examined and the results are reported here. Copyright © 2016 Magnolia Press.
- Authors: Greenslade, Penelope
- Date: 2016
- Type: Text , Journal article
- Relation: Zootaxa Vol. 4066, no. 1 (2016), p. 78-80
- Full Text:
- Reviewed:
- Description: Katianna coeruleocephala was described by Handschin in 1920 from Poespo, Java. It was collected in December, 1896 by Dr. Zehntner with the collecting details given as rotten "Louv" (leaves?) from live orchard. Handschin (1920) labelled his figures of the species (p. 146) as Katianna coerulescephala but the first spelling of the species name (p. 145) has priority. Katianna coeruleocephala has never been recollected. The only mention of the species in the literature since 1920 has been by Suhardjono (1989) in a check list for Indonesia and Suhardjono (2012) who listed it as present on Java and provided the main characteristics of the genus Katianna Börner, 1923. She stated it was a "new" (translate as endemic?) species in Java with a preferred habitat in cold and damp litter but no comment was made on the taxonomic status of the Indonesian species. There has previously been some doubt over both the original generic and family designation given by Handschin in 1920 for the species by both Yoshii (pers. comm.) and Murphy (pers. comm.) who believed it was "likely to belong to the family Bourletiellidae". They did not examine the holotype but based their comments on Handschin's (1920) figure of the mucro which shows it having fairly broad and smooth inner and outer lamellae (Fig. 5). The genus Katianna always has one, the inner, lateral lamella, distinctly toothed. The holotype and single specimen from the Basle Museum of Natural History has been examined and the results are reported here. Copyright © 2016 Magnolia Press.
A global perspective on wetland salinization : Ecological consequences of a growing threat to freshwater wetlands
- Herbert, Ellen, Boon, Paul, Burgin, Amy, Neubauer, Scott, Franklin, Rima, Ardon, Marcelo, Hopfensperger, Kristine, Lamers, Leon, Gell, Peter
- Authors: Herbert, Ellen , Boon, Paul , Burgin, Amy , Neubauer, Scott , Franklin, Rima , Ardon, Marcelo , Hopfensperger, Kristine , Lamers, Leon , Gell, Peter
- Date: 2015
- Type: Text , Journal article
- Relation: Ecosphere Vol. 6, no. 10 (2015), p. 1-43
- Full Text:
- Reviewed:
- Description: Salinization, a widespread threat to the structure and ecological functioning of inland and coastal wetlands, is currently occurring at an unprecedented rate and geographic scale. The causes of salinization are diverse and include alterations to freshwater flows, land-clearance, irrigation, disposal of wastewater effluent, sea level rise, storm surges, and applications of de-icing salts. Climate change and anthropogenic modifications to the hydrologic cycle are expected to further increase the extent and severity of wetland salinization. Salinization alters the fundamental physicochemical nature of the soil-water environment, increasing ionic concentrations and altering chemical equilibria and mineral solubility. Increased concentrations of solutes, especially sulfate, alter the biogeochemical cycling of major elements including carbon, nitrogen, phosphorus, sulfur, iron, and silica. The effects of salinization on wetland biogeochemistry typically include decreased inorganic nitrogen removal (with implications for water quality and climate regulation), decreased carbon storage (with implications for climate regulation and wetland accretion), and increased generation of toxic sulfides (with implications for nutrient cycling and the health/functioning of wetland biota). Indeed, increased salt and sulfide concentrations induce physiological stress in wetland biota and ultimately can result in large shifts in wetland communities and their associated ecosystem functions. The productivity and composition of freshwater species assemblages will be highly altered, and there is a high potential for the disruption of existing interspecific interactions. Although there is a wealth of information on how salinization impacts individual ecosystem components, relatively few studies have addressed the complex and often non-linear feedbacks that determine ecosystem-scale responses or considered how wetland salinization will affect landscape-level processes. Although the salinization of wetlands may be unavoidable in many cases, these systems may also prove to be a fertile testing ground for broader ecological theories including (but not limited to): investigations into alternative stable states and tipping points, trophic cascades, disturbance-recovery processes, and the role of historical events and landscape context in driving community response to disturbance. © 2015 Herbert et al.
- Authors: Herbert, Ellen , Boon, Paul , Burgin, Amy , Neubauer, Scott , Franklin, Rima , Ardon, Marcelo , Hopfensperger, Kristine , Lamers, Leon , Gell, Peter
- Date: 2015
- Type: Text , Journal article
- Relation: Ecosphere Vol. 6, no. 10 (2015), p. 1-43
- Full Text:
- Reviewed:
- Description: Salinization, a widespread threat to the structure and ecological functioning of inland and coastal wetlands, is currently occurring at an unprecedented rate and geographic scale. The causes of salinization are diverse and include alterations to freshwater flows, land-clearance, irrigation, disposal of wastewater effluent, sea level rise, storm surges, and applications of de-icing salts. Climate change and anthropogenic modifications to the hydrologic cycle are expected to further increase the extent and severity of wetland salinization. Salinization alters the fundamental physicochemical nature of the soil-water environment, increasing ionic concentrations and altering chemical equilibria and mineral solubility. Increased concentrations of solutes, especially sulfate, alter the biogeochemical cycling of major elements including carbon, nitrogen, phosphorus, sulfur, iron, and silica. The effects of salinization on wetland biogeochemistry typically include decreased inorganic nitrogen removal (with implications for water quality and climate regulation), decreased carbon storage (with implications for climate regulation and wetland accretion), and increased generation of toxic sulfides (with implications for nutrient cycling and the health/functioning of wetland biota). Indeed, increased salt and sulfide concentrations induce physiological stress in wetland biota and ultimately can result in large shifts in wetland communities and their associated ecosystem functions. The productivity and composition of freshwater species assemblages will be highly altered, and there is a high potential for the disruption of existing interspecific interactions. Although there is a wealth of information on how salinization impacts individual ecosystem components, relatively few studies have addressed the complex and often non-linear feedbacks that determine ecosystem-scale responses or considered how wetland salinization will affect landscape-level processes. Although the salinization of wetlands may be unavoidable in many cases, these systems may also prove to be a fertile testing ground for broader ecological theories including (but not limited to): investigations into alternative stable states and tipping points, trophic cascades, disturbance-recovery processes, and the role of historical events and landscape context in driving community response to disturbance. © 2015 Herbert et al.
Hc-daf-2 encodes an insulin-like receptor kinase in the barber's pole worm, Haemonchus contortus, and restores partial dauer regulation
- Li, Facai, Lok, James, Gasser, Robin, Korhonen, Pasi, Sandeman, Mark, Shi, Deshi, Zhou, Rui, Li, Xiangrui, Zhou, Yanqin, Zhao, Junlong, Hu, Min
- Authors: Li, Facai , Lok, James , Gasser, Robin , Korhonen, Pasi , Sandeman, Mark , Shi, Deshi , Zhou, Rui , Li, Xiangrui , Zhou, Yanqin , Zhao, Junlong , Hu, Min
- Date: 2014
- Type: Text , Journal article
- Relation: International Journal for Parasitology Vol. 44, no. 7 (2014), p. 485-496
- Full Text:
- Reviewed:
- Description: Infective L3s (iL3s) of parasitic nematodes share common behavioural, morphological and developmental characteristics with the developmentally arrested (dauer) larvae of the free-living nematode Caenorhabditis elegans. It is proposed that similar molecular mechanisms regulate entry into or exit from the dauer stage in C. elegans, and the transition from free-living to parasitic forms of parasitic nematodes. In C. elegans, one of the key factors regulating the dauer transition is the insulin-like receptor (designated Ce-DAF-2) encoded by the gene Ce-daf-2. However, nothing is known about DAF-2 homologues in most parasitic nematodes. Here, using a PCR-based approach, we identified and characterised a gene (Hc-daf-2) and its inferred product (Hc-DAF-2) in Haemonchus contortus (a socioeconomically important parasitic nematode of ruminants). The sequence of Hc-DAF-2 displays significant sequence homology to insulin receptors (IR) in both vertebrates and invertebrates, and contains conserved structural domains. A sequence encoding an important proteolytic motif (RKRR) identified in the predicted peptide sequence of Hc-DAF-2 is consistent with that of the human IR, suggesting that it is involved in the formation of the IR complex. The Hc-daf-2 gene was transcribed in all life stages of H. contortus, with a significant up-regulation in the iL3 compared with other stages. To compare patterns of expression between Hc-daf-2 and Ce-daf-2, reporter constructs fusing the Ce-daf-2 or Hc-daf-2 promoter to sequence encoding GFP were microinjected into the N2 strain of C. elegans, and transgenic lines were established and examined. Both genes showed similar patterns of expression in amphidial (head) neurons, which relate to sensation and signal transduction. Further study by heterologous genetic complementation in a daf-2-deficient strain of C. elegans (CB1370) showed partial rescue of function by Hc-daf-2. Taken together, these findings provide a first insight into the roles of Hc-daf-2/. Hc-DAF-2 in the biology and development of H. contortus, particularly in the transition to parasitism. © 2014 Australian Society for Parasitology Inc.
- Authors: Li, Facai , Lok, James , Gasser, Robin , Korhonen, Pasi , Sandeman, Mark , Shi, Deshi , Zhou, Rui , Li, Xiangrui , Zhou, Yanqin , Zhao, Junlong , Hu, Min
- Date: 2014
- Type: Text , Journal article
- Relation: International Journal for Parasitology Vol. 44, no. 7 (2014), p. 485-496
- Full Text:
- Reviewed:
- Description: Infective L3s (iL3s) of parasitic nematodes share common behavioural, morphological and developmental characteristics with the developmentally arrested (dauer) larvae of the free-living nematode Caenorhabditis elegans. It is proposed that similar molecular mechanisms regulate entry into or exit from the dauer stage in C. elegans, and the transition from free-living to parasitic forms of parasitic nematodes. In C. elegans, one of the key factors regulating the dauer transition is the insulin-like receptor (designated Ce-DAF-2) encoded by the gene Ce-daf-2. However, nothing is known about DAF-2 homologues in most parasitic nematodes. Here, using a PCR-based approach, we identified and characterised a gene (Hc-daf-2) and its inferred product (Hc-DAF-2) in Haemonchus contortus (a socioeconomically important parasitic nematode of ruminants). The sequence of Hc-DAF-2 displays significant sequence homology to insulin receptors (IR) in both vertebrates and invertebrates, and contains conserved structural domains. A sequence encoding an important proteolytic motif (RKRR) identified in the predicted peptide sequence of Hc-DAF-2 is consistent with that of the human IR, suggesting that it is involved in the formation of the IR complex. The Hc-daf-2 gene was transcribed in all life stages of H. contortus, with a significant up-regulation in the iL3 compared with other stages. To compare patterns of expression between Hc-daf-2 and Ce-daf-2, reporter constructs fusing the Ce-daf-2 or Hc-daf-2 promoter to sequence encoding GFP were microinjected into the N2 strain of C. elegans, and transgenic lines were established and examined. Both genes showed similar patterns of expression in amphidial (head) neurons, which relate to sensation and signal transduction. Further study by heterologous genetic complementation in a daf-2-deficient strain of C. elegans (CB1370) showed partial rescue of function by Hc-daf-2. Taken together, these findings provide a first insight into the roles of Hc-daf-2/. Hc-DAF-2 in the biology and development of H. contortus, particularly in the transition to parasitism. © 2014 Australian Society for Parasitology Inc.